Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci119g0006 ATGTCAGTTTCATCGCATGCTGACAGATTCATTTTCCTCGGATCTTTCCTACGTCTTAATCTTCTTTCCCATGGCTACGAGGAAAAAGGATTCGATTCTTTTGGAACCCTTATTTGTTCTTCGCGTAGATCTTTCCGGTTCAAACTTTATTCATTGACGTTTTACATGGTTCCTCCTCGCAGGTTGGGAGATCTTCCATTTTCTTTCCAGCGAAGACGACAGTCCGAGAAAATGGCGGAAGAACATCGATGCCAAGCTCCAAGCCTGTGCGCTAACAACTGCGGCTTCTTTGGCAGCCCGGCCACGCAAAACCTATGTTCCAAGTGCTATCGAGATTTGCAGCTCAACGAACAACAATCCTCCTCCGCCAAGTTGGTTCTCAACCAATCCCTTGCTTCCCCGTCTTCGACGACCTCGCAGTCGTCTTCTTTGCCGGAACAGATCGCTGGAACTTCGTCCTCTGCGGCATTTGATCCCCCGCGCGCGGTCGATGATGTCAAGAGTGGATCTTCGGCGCGGCCACCGGCTCAGCCGAGCCGATGCGTGACTTGCAGGCGGCGCGTGGGGCTCACGGGATTCAAGTGCAAGTGCGGATCAACGTTCTGCGGGTCCCACCGGTACCCCGAACAGCACAGATGTGAGTTCGACTTCAAGGGTATGGGTAGGGAGCAGATCGCGAAGGCGAATCCGGTGGTTAAGTCCGAAAAGCTTGAGAAGATCTGA 723 0.527 MSVSSHADRFIFLGSFLRLNLLSHGYEEKGFDSFGTLICSSRRSFRFKLYSLTFYMVPPRRLGDLPFSFQRRRQSEKMAEEHRCQAPSLCANNCGFFGSPATQNLCSKCYRDLQLNEQQSSSAKLVLNQSLASPSSTTSQSSSLPEQIAGTSSSAAFDPPRAVDDVKSGSSARPPAQPSRCVTCRRRVGLTGFKCKCGSTFCGSHRYPEQHRCEFDFKGMGREQIAKANPVVKSEKLEKI 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci119g0006 240 SUPERFAMILY AN1-like Zinc finger 170 235 IPR035896 -
Prci119g0006 240 Gene3D - 76 144 - -
Prci119g0006 240 FunFam Zinc finger AN1-type containing 6 157 236 - -
Prci119g0006 240 ProSiteProfiles Zinc finger A20-type profile. 84 118 IPR002653 GO:0003677|GO:0008270
Prci119g0006 240 SMART AN1_Zf_4 181 218 IPR000058 GO:0008270
Prci119g0006 240 ProSiteProfiles Zinc finger AN1-type profile. 175 221 IPR000058 GO:0008270
Prci119g0006 240 Gene3D - 152 236 IPR035896 -
Prci119g0006 240 Pfam A20-like zinc finger 88 111 IPR002653 GO:0003677|GO:0008270
Prci119g0006 240 PANTHER AN1-TYPE ZINC FINGER PROTEIN 86 240 - -
Prci119g0006 240 MobiDBLite consensus disorder prediction 134 154 - -
Prci119g0006 240 Pfam AN1-like Zinc finger 183 217 IPR000058 GO:0008270
Prci119g0006 240 SMART A20_3 87 111 IPR002653 GO:0003677|GO:0008270
Prci119g0006 240 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 89 136 - -
Prci119g0006 240 MobiDBLite consensus disorder prediction 134 179 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci119g0006 78 240 C2H2 Transcription Factor Family AT3G52800 51.765 2.67e-44 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci119g0006 - - pcin:129295477 478.018