Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Prci119g0005 | ATGGCGGAAGAACATCGATGCCAAGCTCCAAGCCTGTGCGCTAACAACTGCGGCTTCTTTGGCAGCCCGGCCACGCAAAACCTATGTTCCAAGTGCTATCGAGATTTGCAGCTCAACGAACAACAATCCTCCTCCGCCAAGTTGGTTCTCAACCAATCCCTTGCTTCCCCGTCTTCGACGACCTCGCAGTCGTCTTCTTTGCCGGAACAGATCGCTGGAACTTCGTCCTCTGCGGCATTTGATCCCCCGCGCGCGGTCGATGATGTCAAGAGTGGATCTTCGGCGCGGCCACCGGCTCAGCCGAGCCGATGCGTGACTTGCAGGCGGCGCGTGGGGCTCACGGGATTCAAGTGCAAGTGCGGATCAACGTTCTGCGGGTCCCACCGGTACCCCGAACAGCACAGATGTGAGTTCGACTTCAAGGGTATGGGTAGGGAGCAGATCGCGAAGGCGAATCCGGTGGTTAAGTCCGAAAAGCTTGAGAAGATCTGA | 492 | 0.5752 | MAEEHRCQAPSLCANNCGFFGSPATQNLCSKCYRDLQLNEQQSSSAKLVLNQSLASPSSTTSQSSSLPEQIAGTSSSAAFDPPRAVDDVKSGSSARPPAQPSRCVTCRRRVGLTGFKCKCGSTFCGSHRYPEQHRCEFDFKGMGREQIAKANPVVKSEKLEKI | 163 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Prci119g0005 | 163 | ProSiteProfiles | Zinc finger A20-type profile. | 7 | 41 | IPR002653 | GO:0003677|GO:0008270 | |
| Prci119g0005 | 163 | SMART | AN1_Zf_4 | 104 | 141 | IPR000058 | GO:0008270 | |
| Prci119g0005 | 163 | Gene3D | - | 1 | 68 | - | - | |
| Prci119g0005 | 163 | FunFam | Zinc finger AN1-type containing 6 | 80 | 159 | - | - | |
| Prci119g0005 | 163 | ProSiteProfiles | Zinc finger AN1-type profile. | 98 | 144 | IPR000058 | GO:0008270 | |
| Prci119g0005 | 163 | Pfam | A20-like zinc finger | 11 | 34 | IPR002653 | GO:0003677|GO:0008270 | |
| Prci119g0005 | 163 | Pfam | AN1-like Zinc finger | 106 | 140 | IPR000058 | GO:0008270 | |
| Prci119g0005 | 163 | SMART | A20_3 | 10 | 34 | IPR002653 | GO:0003677|GO:0008270 | |
| Prci119g0005 | 163 | SUPERFAMILY | AN1-like Zinc finger | 93 | 158 | IPR035896 | - | |
| Prci119g0005 | 163 | Gene3D | - | 74 | 159 | IPR035896 | - | |
| Prci119g0005 | 163 | MobiDBLite | consensus disorder prediction | 51 | 77 | - | - | |
| Prci119g0005 | 163 | SUPERFAMILY | Glucocorticoid receptor-like (DNA-binding domain) | 12 | 59 | - | - | |
| Prci119g0005 | 163 | MobiDBLite | consensus disorder prediction | 51 | 102 | - | - | |
| Prci119g0005 | 163 | PANTHER | AN1-TYPE ZINC FINGER PROTEIN | 9 | 163 | - | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Prci119g0005 | 1 | 163 | C2H2 Transcription Factor Family | AT3G52800 | 50.877 | 2.16e-45 | 145 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Prci119g0005 | - | - | pcin:129295477 | 324.324 |