Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1182g0004 ATGTCGGAAACAGTAGCAGTACTTGTAATTGAGAGGCTTATCTCACTACTCAGCCGCTCCGTAATGTTTATGATGGATCATGGTGGTGCAGAAATCACTGATACCGTAGGTGATCTAAAGTACATTAAAAGCTACCTAAAAAGCGCCAACGACGAGGCACTGGAGGCAGGCAGAAAAGATGAATTAAAAGAGTGGGTGAAGCAAGTGAGAGAAGTTGCTTTTCGCATGGAAGATGTGATCGATGAATTCTTGTTGAAAGTGAAAAAGCATGGCCAAAAGCAACGACTTGTTCGCTTTGTTGCTAAAACTGGTAACGTTCTCAAAACTGTCAAAGTCCGTCTTAAGATACAATCGGAGATTCGGGACATCAAAAAAACACGAGAAAGACTCGATAAATTAAAAGATTCTTTCGGATTAGACACGTCATCGTCAGGACGGAGAGCAGAGATGTCTGCAACTGCCGGACATGGCCTTCGAAAGAGTGCTCGGTTCATGGATGAAGCTGAACTTGTGGGTGTTGACGAGACTAGGGAAATGCTCATGGGTTGGCTAAGAGAACAAAATGGACGCACAGCAGTAATTTCAGTGGTCGGCGAAGGGGGATTAGGAAAAACCGCGATTGTGAATAACTTGTATAAGAAGCAAAAAGACGAAAGATATTTTGACTGTTACGCTTGGATCACTGTCTCTCGTTCACTCGAAGCCAAAAGACTATTAAGAACTATGATCCGTGACTTCGACAAAAATGCTACCATGAAAATTGAAGACGACATGGAACAACATGATTTGACTGAGAAACTTAAACAATACTTGCAAACAAAGAAGTATATGATTGTTTTTGATGATGTACGGGACATCAACTTTTGGGGAAATTTTCTTAATGCATTACCAGAGGCAGATAAAGGCAAAGACAGCAGGATAATAATTACCGCAAGAAATAAAGACATTGCAGATAATTGCAGAGTTCGCAGGGCTGACCGTTACACTCATGAGCTAAAACCCTTAGATCCAAAAGTTGCTTTAAAGCTCTTTTACAGTGAGGTCTTTGATTCTAAAGGTTGTGACGATCAAGAGCTGAAAAAATTGTCTGAAGATTTCGTGAGCAAGTGTAATGGAGTGCCATTAGCAATTGTAGCTCTCGCGAGTCTCTTATCAACTAAAAAGGAAGATGTCTCAGAATGGGAAAAGGTACGCCGGAGTCTAAACTCAAAATTCAGAAATAATCCCCATTTAAGAAGTTATTTCCAAGTGTTATCAGAGAGTTACGACGATCTTGATCACCACCTCAAGTCATGCCTCTTGTACTTTGGTCTTTTTCCGGAAGGTTATGCCATTAGTTCCACTCGACTCATCAATTTGTGGACAGAAGAGGGTTGCCTAAATCATGATGATGGTGATCGAGTAAGGACTGAGGAAGTAGCGGAAAGTTACTTGTGTGAACTAATTAATCGGAGCTTGGTTAAAGTATCGGCAAGGGATCCTGATGGCAGAGTTCGAAGATGTCACATCCATGATTTAATGCACGAATTTCTTCTCAAGAAGTGTGAGGATCTGGACTTTGGACAAGTCATAAAAAGTGAGCAGTTTCAGTTTCATCCATGGACCAGGCGCCTGTCGATCCTCACAAATAGCATTCATGATGATATTACAAGGGCTGCAAAACACAAGAGAGTGAGGTCTTGCTTTTGTTTTAACTTACAAGAGTTGCAAAAGCCTCTGGTGCAATCATTTCTATCCAGCTTCAAGTTCTTGAAAACCCTGGACTTTGAAGATGCTCCTCTCGATCATCTTCCCAAAGCCGTCGGGACTTTGCTGCATCTAAAGTATCTGAATCTAAGGAACACGCGGATCACAGCCATTCCTAAGTTTATTTGTAAGCTTCTTAATCTAGAGATTCTGAACCTAAAGCATACTCTAGTAACAGAGCTGCCACCACATATTTACCAGCTTGTCAAGTTGCGTCATCTCATAGCATATTCATCTTCTCATGGAGTAATACTAAAGAAAGGCATCAAGAGTTTAAAGGCTCTGCAGAAGCTAGCAAAAGTTGATGCATCTAATGATGAGGATGGTGTCATCGAGGAATTGATTCACATGAAGGAAATGAGGAGGCTGGGCATTATTAACATAAGGAGGCAACACGGGAGACCGCTATGTACTGCAATAGAGAATATGCAGCTTCTTTGCTCATTAAGTATTGCAGCACCATATGCCGGTGGGATCAGTGAAGTTCTTAGTTTGCATTCCATAAACAACCCTCCTGAGGACTTGAAACGTCTTTACTTGGTTGGCCGCTTAGAGAAATTACCAAATTGGATTGCCAGACTTGGCCGGCTAGTGAAGCTCCGACTGGCTTGGTCAGGAATAGAAGAAGACCCAATGCTTGCTCTCAAGGACTTAACAGATTTGGTGGATCTTCAGTTATTGAAATCAGCATACGATGGCGAGGAGTTACACTTCAAAAGTGGATGGTTTAAGAAGCTTAAGGTTTTGGAATTACGTGGCATGCAGAGGCTTAGGAGGTTAAGAATAGAGTCGGCAGCAATGTCTTCGCTGGAACATCTACAACTTGGGTCTTGCCATCAGATCGAAAAGGTGCCCAGTGATATTCCAAACCTAAGATCTCTCAAATTTCTTCATCTTGAAGATATGTCTAGAGACTTTGTGACAAATATGCAACAAGAAGGTTATTACAAATTCAGCCACTTGTCATCGGTGACTTATTCCATGGATGATGGCCACAATCTTTGTATTTATCCTTGA 2763 0.4162 MSETVAVLVIERLISLLSRSVMFMMDHGGAEITDTVGDLKYIKSYLKSANDEALEAGRKDELKEWVKQVREVAFRMEDVIDEFLLKVKKHGQKQRLVRFVAKTGNVLKTVKVRLKIQSEIRDIKKTRERLDKLKDSFGLDTSSSGRRAEMSATAGHGLRKSARFMDEAELVGVDETREMLMGWLREQNGRTAVISVVGEGGLGKTAIVNNLYKKQKDERYFDCYAWITVSRSLEAKRLLRTMIRDFDKNATMKIEDDMEQHDLTEKLKQYLQTKKYMIVFDDVRDINFWGNFLNALPEADKGKDSRIIITARNKDIADNCRVRRADRYTHELKPLDPKVALKLFYSEVFDSKGCDDQELKKLSEDFVSKCNGVPLAIVALASLLSTKKEDVSEWEKVRRSLNSKFRNNPHLRSYFQVLSESYDDLDHHLKSCLLYFGLFPEGYAISSTRLINLWTEEGCLNHDDGDRVRTEEVAESYLCELINRSLVKVSARDPDGRVRRCHIHDLMHEFLLKKCEDLDFGQVIKSEQFQFHPWTRRLSILTNSIHDDITRAAKHKRVRSCFCFNLQELQKPLVQSFLSSFKFLKTLDFEDAPLDHLPKAVGTLLHLKYLNLRNTRITAIPKFICKLLNLEILNLKHTLVTELPPHIYQLVKLRHLIAYSSSHGVILKKGIKSLKALQKLAKVDASNDEDGVIEELIHMKEMRRLGIINIRRQHGRPLCTAIENMQLLCSLSIAAPYAGGISEVLSLHSINNPPEDLKRLYLVGRLEKLPNWIARLGRLVKLRLAWSGIEEDPMLALKDLTDLVDLQLLKSAYDGEELHFKSGWFKKLKVLELRGMQRLRRLRIESAAMSSLEHLQLGSCHQIEKVPSDIPNLRSLKFLHLEDMSRDFVTNMQQEGYYKFSHLSSVTYSMDDGHNLCIYP 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1182g0004 920 Gene3D - 427 515 IPR036388 -
Prci1182g0004 920 Pfam NB-ARC domain 176 423 IPR002182 GO:0043531
Prci1182g0004 920 CDD RX-CC_like 38 125 IPR038005 -
Prci1182g0004 920 Pfam Rx N-terminal domain 9 97 IPR041118 -
Prci1182g0004 920 Gene3D - 7 117 - -
Prci1182g0004 920 Gene3D - 155 325 IPR027417 -
Prci1182g0004 920 SUPERFAMILY L domain-like 503 894 - -
Prci1182g0004 920 Coils Coil 116 136 - -
Prci1182g0004 920 Gene3D - 335 426 IPR042197 -
Prci1182g0004 920 PRINTS Disease resistance protein signature 270 284 - -
Prci1182g0004 920 PRINTS Disease resistance protein signature 847 863 - -
Prci1182g0004 920 PRINTS Disease resistance protein signature 370 384 - -
Prci1182g0004 920 PRINTS Disease resistance protein signature 193 208 - -
Prci1182g0004 920 FunFam Probable disease resistance protein At1g63360 422 513 - -
Prci1182g0004 920 FunFam Probable disease resistance protein At1g61300 155 325 - -
Prci1182g0004 920 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 161 436 IPR027417 -
Prci1182g0004 920 PANTHER DISEASE RESISTANCE PROTEIN RP 61 860 IPR044974 GO:0006952
Prci1182g0004 920 Gene3D Ribonuclease Inhibitor 544 913 IPR032675 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1182g0004 166 383 WRKY Transcription Factor Family AT4G12020 26.667 2.36e-08 56.2