Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1176g0002 ATGCCGGGGAACAATTATAACTCCGGTGCTACTCCTTCTACACCTAGATCAAGATTAGAAAGGCTTCTGAGGGAAAGAGAGCTAAGAAAATTCAACAGGCATTCTCAACCAGTTGAGGAGACAAGAGACAGCAACAAAGAACTTGAACTTTATAGTGATGATTTGTCTTCCAGCGGGATTGACATTGGTGAGGAAGAATTACCTGAAAAGGTTGCAGCTGCAGGATTGTCAGATAAATTTCAGAGGCAAGATGAAGCGTCACCCAGACAACGCTTATTGGTGGTGGCCAACAGGTTACCTGTGTCTGCTACTAGAAGGGGTGTGGATTCATGGCAACTTGAGATCAGCGTAGGGGGACTAGTCAGTGCAATTTTAGGCGTAAAGGAGTTTGACACTACGTGGATTGGGTGGGCTGGTGTGAATGTGCCGGATGAAGTTGGCCAGAACACATTGACCAAAGCTTTAGCTGAAAAGAGATGCATCCCAGTATTTCTTGATGAGGAGATAGTTCATCAATATTACAATGGTTACTGCAACAACATCTTATGGCCTCTTTTTCATTACCTTAGGCTTCCACAAGAGGACCGACTTGCTACCACACGTACTTTACAATCTCAATTCGATGCTTACAAGATAGCAAACCAATTGTTTGCAGATGTTGTAAACAAGTATTACCAGGAAGGTGATGTCGTTTGGTGCCATGACTACCACCTAATGTTTCTTCCAAAATGTTTAAAAGAATATGACGAAAAAATGAAAGTTGGCTGGTTTCTCCACACACCATTTCCTTCCTCAGAAATACATAGGACACTGCCATCCAGATCTGAACTATTGAGATCTGTACTTGCTGCTGACTTGGTGGGGTTTCATACATATGATTATGCAAGGCATTTTGTTAGTGCTTGTACTCGAATTCTTGGACTTGAGGGTACACCTGAAGGAGTAGAAGATCATGGGAAACTGATTCGTGTAGCTGCATTTCCCATCGGGATTGACCCTGAACGATTTATCCGAGCCCTCGAACTCCCTCAAGTCCAGGATCACATAATAGAACTGAAAGAACGATTTGCAGGCCGAAAGGTAATGCTAGGTGTTGATCGTCTTGATATGATAAAAGGAATCCCCCAGAAAATCTTGGCATTTGAGAAGTTCCTTGAGGAGAATCCTGACTGGCGTGATAAAGTAGTCTTGATACAAATTGCTGTTCCTACAAGAACTGATGTTCCTGAATACCAAAAGCTTACAAGTCAGGTGCATGAGATTGTTGGACGCATTAATGGAAGATTTGGAACACTTACTGCTGTTCCGATACATCACTTGGACCGTTCGCTTGACTTTCATGCATTATGTGCACTGTATGCTGTTACTGATGTAGCACTCGTCACATCTTTAAGGGATGGAATGAACCTTGTCAGCTATGAGTATGTTGCTTGCCAAGCTTCTAAGAATGGGGTTCTCATTCTTAGTGAGTTTGCAGGTGCAGCGCAGTCTCTCGGTGCTGGTGCTGTCTTGGTGAATCCATGGAATATCACTGAGGTTGCTGCCTCCATTGCTTATGCCTTGAACATGCCTGCTGATGAAAGAGAGAAACGCCACCAGTTCAACTTCAAGCATGTGACCACTCACACATCTCAGGAGTGGGCTGCAACATTCGTGAGTGAACTGAATGACACCATTGTTGAAGCTCAGCTTAGGAGGAGACAAGTTCCACCCCCACTTCCCCATGAAGCTACAGTTGATCGTTACTCAAAATCCAATAATCGATTAATCATTCTGGGATTCAATGCCACTTTGACTGAACCAGTGGATGCCCTTGGGAGTGGTGGCCAAATTAGAGAACTGGAGCTTAAATTGCACCCAAATGTAAAAGATCCTTTAAAGAAGTTATCTGATGATCCGAAGACAACAGTAATTGTTCTTAGTGGGAGTGATCGAGGCGTCCTGGACAAAAACTTCAACGAATACGACCTGTGGCTGGCAGCAGAAAATGGGATGTTTTTACGTCCTACTACTGGTGAATGGATGACAACCATGCCTGAAATGTTAAACATGGATTGGATTGATAGTGTGAAGCAAGTTTTTGAGTACTTTACTGAAAGAACACCACGATCCCATTTTGAGCTGCGTGAGACTTCAATTGTATGGAATTACAAGTATGCAGATGTTGAGTTTGGAAGAATTCAAGCAAGAGATCTACTGCAGCATCTATGGACAGGCCCAATATCAAATGCATCAGTTGATGTTGTCCAAGGTGGTAGATCTGTTGAGGTTCGAGCGGTTGGTGTCTCAAAGGGAGCAGCAATTGATCGGATTCTGGGAGAGGTAGTTCACCACAAGGGCCTGGAGGCACCAATTGATTATGTTCTTTGCGTTGGACACTTTCTGCCAAAGGATGAAGATGTCTACTCATTTTTTGAGCCGGAGCTCCCCTCCGAATCACCGACAACAGCAAGAGCTATGCTATCCAACCCTTACAAGCCAGCAAAAAATTGGTCTAAGGCAGCTCGACTCAAGAAGCAACTCTCCATGTCAACTTTAGAAAAGAGAAAAATGGATCAAGCAATTGGGATTCCATTGCCGCAGACATATCATGATAGAGTATCACTGCGAGAGGGTTCGTCGGTGCTTGATCTTAAAGGTGATAATTACTTCTCTTGTGCTGTTGCACGAAAGAGATCAAGCGCAAGATATATTCTTAAAACATCAGATCATGTTGCCCAACTCTTGAAGGACCTGGCGGATCGTGCATCATCAGTATCAACTTGA 2766 0.4371 MPGNNYNSGATPSTPRSRLERLLRERELRKFNRHSQPVEETRDSNKELELYSDDLSSSGIDIGEEELPEKVAAAGLSDKFQRQDEASPRQRLLVVANRLPVSATRRGVDSWQLEISVGGLVSAILGVKEFDTTWIGWAGVNVPDEVGQNTLTKALAEKRCIPVFLDEEIVHQYYNGYCNNILWPLFHYLRLPQEDRLATTRTLQSQFDAYKIANQLFADVVNKYYQEGDVVWCHDYHLMFLPKCLKEYDEKMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTPEGVEDHGKLIRVAAFPIGIDPERFIRALELPQVQDHIIELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPDWRDKVVLIQIAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEYVACQASKNGVLILSEFAGAAQSLGAGAVLVNPWNITEVAASIAYALNMPADEREKRHQFNFKHVTTHTSQEWAATFVSELNDTIVEAQLRRRQVPPPLPHEATVDRYSKSNNRLIILGFNATLTEPVDALGSGGQIRELELKLHPNVKDPLKKLSDDPKTTVIVLSGSDRGVLDKNFNEYDLWLAAENGMFLRPTTGEWMTTMPEMLNMDWIDSVKQVFEYFTERTPRSHFELRETSIVWNYKYADVEFGRIQARDLLQHLWTGPISNASVDVVQGGRSVEVRAVGVSKGAAIDRILGEVVHHKGLEAPIDYVLCVGHFLPKDEDVYSFFEPELPSESPTTARAMLSNPYKPAKNWSKAARLKKQLSMSTLEKRKMDQAIGIPLPQTYHDRVSLREGSSVLDLKGDNYFSCAVARKRSSARYILKTSDHVAQLLKDLADRASSVST 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1176g0002 921 Pfam Glycosyltransferase family 20 91 556 IPR001830 GO:0003824|GO:0005992
Prci1176g0002 921 Gene3D - 616 774 IPR023214 -
Prci1176g0002 921 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 680 760 - -
Prci1176g0002 921 Gene3D - 680 760 - -
Prci1176g0002 921 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 83 337 - -
Prci1176g0002 921 SUPERFAMILY HAD-like 589 909 IPR036412 -
Prci1176g0002 921 CDD GT20_TPS 91 556 IPR001830 GO:0003824|GO:0005992
Prci1176g0002 921 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 338 540 - -
Prci1176g0002 921 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 90 559 - -
Prci1176g0002 921 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 91 556 IPR012766 GO:0003825|GO:0005992
Prci1176g0002 921 CDD HAD_TPP 589 824 - -
Prci1176g0002 921 Pfam Trehalose-phosphatase 616 809 IPR003337 GO:0003824|GO:0005992
Prci1176g0002 921 MobiDBLite consensus disorder prediction 30 49 - -
Prci1176g0002 921 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 83 913 IPR001830 GO:0003824|GO:0005992
Prci1176g0002 921 FunFam Alpha,alpha-trehalose-phosphate synthase 614 690 - -
Prci1176g0002 921 Gene3D Glycogen Phosphorylase B; 338 540 - -
Prci1176g0002 921 Gene3D Glycogen Phosphorylase B; 82 337 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1176g0002 1 918 Trehalose Biosynthesis Gene Families AT1G78580 72.251 0.0 1373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1176g0002 K16055 - qsa:O6P43_012860 1468.37