Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1176g0001 ATGGCTGCATTTGTGCTGCTCATATTCCTTTTTCCTGTGGCTTTCTGCATCGGCAACAGCAGCAAGAACTACATAGTGGATTTCGGAGAGCAGCATAAAGATGTGCAGCTTCATGAAATGGAAGACATTCATCGTTCTTATCTGCGTCTCGTGAAGGAGACAGACGAAGAAGCAGAAGCTTGTCATCTTTACAGTTACAAGCACAGCTTCAATGGCCTCGCGGCGTCCCTCACTCCAGAAGAAGCCTCCAGACTTGCCCGAATCAAAGGAGTGGTGTCAGTGCGAGAGAGCAAGGGAAGAAAGGCCTACTCTCTGCACACCACAAGATCATGGAACTTTCTGGATTTGAAGCACCCTGCAAATCATGATCATGATGATGATGATGATGGCATCTTGTCCAGAGCTAAGTATGGCCAAGACATCATAGTCGGCATACTTGATACTGGAATTTGGCCAGAATCCAAGAGCTTCAGTGATGAAGGAATGGACCCGGTTCCTGCCAGATGGAAGGGAATCTGCCAAAATGGAACTGCTTTCAATGCATCTACCTGTAATCGAAAGATCATTGGAGCTCGGTACTACCTGAATGGATATCAAGGCACATTTGGTCTTCTAGACGAATCCCAGGACATCAAATCAGCTCGTGACAAAGACGGCCACGGCACTCACCTGGCTTCCATCATCGCCGGACGCACCGTTCCGAATGTCACAGGCTACGGCGGTTTTGCCGGTGGCACCGCGTCGGGAGGCGCCCCCATGGCCCGCCTCGCCATATACAAGGTATGCTGGGTTTGGCCAGGCAGTTCTTTTGAGTCAGGGAATCACTGTGACGACTTGGACATCACCAAGGCTTTCGACGACGCCATCGGAGACGGCGTCGACGTAATAAGCTTCTCCTTCGGTTTCGATGACGCTCAGAATTTTGTACGCGACAAGAGTGCTATCGGATCCTTGCACGCCTTGAAGAAGAATATCGTGGTGGTTTCTAGTGCCGGCAATAGCGGACCTGATGATCAAACTGTGACCAATGTTGCTCCTTGGCTCATCACTGTTGGTGCTAGTCATACAGATCGAACCTTTCCTGCTCCTCTTGTTCTTGCCAATGGCACAAAAATTCAGGGACAATCAATCACTCCAGTGCAAATGGACAACAGTTTGCACAGCTTGGTGTTGGCCAGCGATGTTGAAAAACCAACGATTTCTGAAACAGATTCAGGGTATTGTCTGGACGGCAGTCTTGACTCAGAGAAGGTGAAAGGGAAGATAGTGATGTGTCTGAGGGGGAAAGGTAGTCCATTACATCAAAGCCTGGAAGTTAAAAACAAAGGTGGGCTAGGTTTCATCTTGGGAAATGATCCTGATCATGGGAATGATGTTTCCTGTTTGCCCAATCAAATTCCATCCACTGGTGTTGCTTTTGAGGATACCAAAAAGCTCATCCATTACATAAGAACTACTAAGGACCCTAAGGCTCGCATTCTTCCTGGGCGCACATCCTTCAATTCTAAACCGGCACCCACCATTACCTCCTTCTCTGGTAGGGGTCCAAATCCTATTGACCCTAACTTCATAAAGCCTGACATAATAGCTCCAGGAAGCGAGATATTGGGAGCATGGACAGATGTGGATGGGCCTACAAGAAATAGTAAGGGTGGCGACATGAGAAAGACTCAGTACAATATAATGTCTGGAACTTCTGTGTCTACTCCTCATGTTGCTGCTGCAGCAGTTCTTATCAAAGCCATTCACCCTACTTGGAGTGCATCAGCTATTAAATCTGCCCTCATGACCACAGCCTCGACGACAGATAACATAGGAAATCCAATAACGGATCAAGATGGAAAACCTGCGACGCCATTCGAAATGGGATCAGGCCACCTGCGACCTCTGAAAGCAGCAGATCCTGGACTGGTTTATAATGCCACTTACGAGGATTACGTTCTTTATACCTGTGGCCTTGGACTGACACACGGCATGAATATTCCGTATCAATGTCCAGCTGAAGTGCCTGAACCAGTCAACCTCAACTACCCATCCATACAAATTTCCAGGCTCCTTGGAACCAAGACCGTTACTAGAAGAGTCACCAACGTTGGACGCAGCAATTCTACTTACACCTTCCATTCTGAGGCACCCAAGGAATATACTATCACTGCCTCTCCGAATGTTCTGGTGTTTGATCATATTGGTCAGGAATTGAGCTTCAACATCACCATCACAGTCGTTAGCTGGAATTACCCCACCCAGTACGATCCAGATCTCTATTATTTTGGATCCTATGCTTGGACTGCTAAAGACCATGTCGTGAGAAGCCCTGTCGCCGTGTCTTTCCCATAA 2337 0.4788 MAAFVLLIFLFPVAFCIGNSSKNYIVDFGEQHKDVQLHEMEDIHRSYLRLVKETDEEAEACHLYSYKHSFNGLAASLTPEEASRLARIKGVVSVRESKGRKAYSLHTTRSWNFLDLKHPANHDHDDDDDGILSRAKYGQDIIVGILDTGIWPESKSFSDEGMDPVPARWKGICQNGTAFNASTCNRKIIGARYYLNGYQGTFGLLDESQDIKSARDKDGHGTHLASIIAGRTVPNVTGYGGFAGGTASGGAPMARLAIYKVCWVWPGSSFESGNHCDDLDITKAFDDAIGDGVDVISFSFGFDDAQNFVRDKSAIGSLHALKKNIVVVSSAGNSGPDDQTVTNVAPWLITVGASHTDRTFPAPLVLANGTKIQGQSITPVQMDNSLHSLVLASDVEKPTISETDSGYCLDGSLDSEKVKGKIVMCLRGKGSPLHQSLEVKNKGGLGFILGNDPDHGNDVSCLPNQIPSTGVAFEDTKKLIHYIRTTKDPKARILPGRTSFNSKPAPTITSFSGRGPNPIDPNFIKPDIIAPGSEILGAWTDVDGPTRNSKGGDMRKTQYNIMSGTSVSTPHVAAAAVLIKAIHPTWSASAIKSALMTTASTTDNIGNPITDQDGKPATPFEMGSGHLRPLKAADPGLVYNATYEDYVLYTCGLGLTHGMNIPYQCPAEVPEPVNLNYPSIQISRLLGTKTVTRRVTNVGRSNSTYTFHSEAPKEYTITASPNVLVFDHIGQELSFNITITVVSWNYPTQYDPDLYYFGSYAWTAKDHVVRSPVAVSFP 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1176g0001 778 Gene3D - 357 500 - -
Prci1176g0001 778 Pfam Peptidase inhibitor I9 24 99 IPR010259 -
Prci1176g0001 778 Gene3D Peptidase S8/S53 domain 140 646 IPR036852 GO:0004252|GO:0006508
Prci1176g0001 778 Pfam PA domain 405 479 IPR003137 -
Prci1176g0001 778 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 103 IPR037045 -
Prci1176g0001 778 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 56 775 IPR045051 -
Prci1176g0001 778 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Prci1176g0001 778 PRINTS Subtilisin serine protease family (S8) signature 563 579 IPR015500 -
Prci1176g0001 778 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Prci1176g0001 778 SUPERFAMILY Subtilisin-like 108 637 IPR036852 GO:0004252|GO:0006508
Prci1176g0001 778 FunFam Subtilisin-like protease SBT1.5 140 381 - -
Prci1176g0001 778 Pfam Subtilase family 138 610 IPR000209 GO:0006508|GO:0008236
Prci1176g0001 778 Gene3D - 651 777 - -
Prci1176g0001 778 ProSitePatterns Serine proteases, subtilase family, serine active site. 564 574 IPR023828 -
Prci1176g0001 778 Pfam Fibronectin type-III domain 674 775 IPR041469 -
Prci1176g0001 778 ProSiteProfiles Serine proteases, subtilase domain profile. 110 633 - -
Prci1176g0001 778 CDD PA_subtilisin_like 364 493 - -
Prci1176g0001 778 CDD Peptidases_S8_3 103 600 IPR034197 -
Prci1176g0001 778 FunFam subtilisin-like protease SBT1.5 357 500 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1176g0001 24 777 Subtilisin-like Serine Gene Family AT5G45650 50.845 0.0 746