Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1174g0003 ATGCATTTTGGACTCCTCACATCAAGAATGGGTTCATGCAATTGTTTTAAGACAATGATTTGCTTAGGAAAGTCAAAAGGTAGTTCAAAGAAAGCAAAGGGAGATCTACCTTCAGGGAAACTCAGTGCAGTGGAGTCAAACAATCACAGAGGAAAAGGTTTTAGTGGTGTAGAGAATGGTATTAAAAGTGAAAGTCTGGTGTTACCTGGGGTCTCAGTTGAAACAATTGCTGCAACAAAAATCCAAACAGCATATCGGGCTTATAAGGCAAGAAAATCTCTGCGTCGTTTGAAAGGGTTTGCAAAATTAAAGATCATGACTCAACGTCACTCTGTTAAAAAGCAAGCTGAGACAACTTTAACTTATCTTCATGAATGGAGCAAGGTACAGAGTGAGATTAGAGCTCGCCGAATCTGTATGGTGACAGAAGACAGGATCAGACGGAAGAAGCTAGAGTCACAACAAAAACTTGAGGCAGAGCTCCATGATCTAGAGGTTGAATGGTGTGGTGGCCCTGAAACCATGGAGGAAATCCTTGCAAGGATACATTACAGAGAAGAAGCAGCAGTAAAACGGGAAAGAGCCCTTGCATATGCCTTTTCTCATCAATGGAGATCCAATTCTACACAGAACCAAGGGCTGGGAAATTATGAACTTAACAAAGCTAACTGGGGTTGGAGCTGGAAGGACCGCTGGATCGCCGCTCGCCCATGGGAAAGCCGTGTTGGCAATACACCTCCTAGAAAGTCTCAAACTAAGCAAGCTAGCAAGGTTCAAAAGTACAGGAACTCTTCAACATCTAAAAGTGCTGTTTCAGTTAAGCCAACAATGGCTAATCCAAAAGCTAGGAGATTGTCTTACTCAGACATAGAGAAAACTGTGACACATGAAGTAAAGCTATAA 903 0.423 MHFGLLTSRMGSCNCFKTMICLGKSKGSSKKAKGDLPSGKLSAVESNNHRGKGFSGVENGIKSESLVLPGVSVETIAATKIQTAYRAYKARKSLRRLKGFAKLKIMTQRHSVKKQAETTLTYLHEWSKVQSEIRARRICMVTEDRIRRKKLESQQKLEAELHDLEVEWCGGPETMEEILARIHYREEAAVKRERALAYAFSHQWRSNSTQNQGLGNYELNKANWGWSWKDRWIAARPWESRVGNTPPRKSQTKQASKVQKYRNSSTSKSAVSVKPTMANPKARRLSYSDIEKTVTHEVKL 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1174g0003 300 Coils Coil 147 167 - -
Prci1174g0003 300 Pfam IQ calmodulin-binding motif 77 95 IPR000048 GO:0005515
Prci1174g0003 300 ProSiteProfiles IQ motif profile. 74 102 IPR000048 GO:0005515
Prci1174g0003 300 MobiDBLite consensus disorder prediction 244 274 - -
Prci1174g0003 300 MobiDBLite consensus disorder prediction 239 288 - -
Prci1174g0003 300 PANTHER IQ-DOMAIN 5-RELATED 63 271 - -
Prci1174g0003 300 MobiDBLite consensus disorder prediction 26 52 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1174g0003 10 287 IQD Protein Family AT2G33990 52.669 3.06e-85 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1174g0003 - - gmx:100813685 393.275