Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1173g0003 ATGTCAGTGGAACCTCCTCCTTTCCAAGAATCAGCGCGATGTGATGTCTGCAATTGCAGCTTCAACACCTTCAGGAGACGGCACCACTGTCGATGCTGTGGGAGAACATTGTGCCATGAACATTCATCAAATCAAATGGCTTTACCACAGTTTGGCATTTACTCAAATGTTAGAGTATGTGCTGATTGTTTCAACAATTCAGGATCTGGGAAGCATGACCCACAGCTTTCTTCGGATGGAACAAATAACATTACAAATGTAATTTCCAAACTAGACATCGACGCAGATGTAAATTCTAAGACAGCATCAAGAGCAGAGAGTAAGGTTGCATTAGACATAAAAGAGTGTAAGTGTGGAATGCCTCTTTGCATTTGTGAAGCTCCAGCCCCTTCCTCTGATGCACTGCCCCAGCAGAAAATCACTCCAGTCACAACACCTCTGGCAAACCCTAAACCAAAGAAGTCAGATGTTGTTCCTAAAAGTAAAAGCTCCACATCAAACAGCAAGTTTAGTTCTTTCAATCTTGGTCACGTATCCAGTGGTGCCTCTGATGGTTCCCGGATGGAGTATGAAGCTACTGGAGAGGGTTTGAGAGAAGCAATAAAAAATGGTGACGTTGCTTCTGTCAAGAAACTTCTAAATCAGGGTGTGGATTCAAATTACAGGGACAAGCAAGGACTTTCTTTATTGCATTTGGCTGCTGTCTTCAATCAGACTGATATAGTTTTCATTCTCATGGATGCTGGGGCAAGCCTAGAGTACAAGAATGCACAAGGAGAAACGCCCTTCGATTGTGCGCCAGCTACGTTGCAATACAAAATGCGAAAGAAGATGGAAGAGGGCAAGGCAATGGATGGTCAAAGCATTTGA 870 0.4356 MSVEPPPFQESARCDVCNCSFNTFRRRHHCRCCGRTLCHEHSSNQMALPQFGIYSNVRVCADCFNNSGSGKHDPQLSSDGTNNITNVISKLDIDADVNSKTASRAESKVALDIKECKCGMPLCICEAPAPSSDALPQQKITPVTTPLANPKPKKSDVVPKSKSSTSNSKFSSFNLGHVSSGASDGSRMEYEATGEGLREAIKNGDVASVKKLLNQGVDSNYRDKQGLSLLHLAAVFNQTDIVFILMDAGASLEYKNAQGETPFDCAPATLQYKMRKKMEEGKAMDGQSI 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1173g0003 289 ProSiteProfiles Ankyrin repeat profile. 225 257 IPR002110 GO:0005515
Prci1173g0003 289 Gene3D - 177 274 IPR036770 -
Prci1173g0003 289 MobiDBLite consensus disorder prediction 133 169 - -
Prci1173g0003 289 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 4 70 IPR013083 -
Prci1173g0003 289 Pfam FYVE zinc finger 9 66 IPR000306 GO:0046872
Prci1173g0003 289 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 8 68 IPR017455 -
Prci1173g0003 289 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 27 2 282 - -
Prci1173g0003 289 CDD FYVE_scVPS27p_like 7 64 - -
Prci1173g0003 289 SMART fyve_4 3 69 IPR000306 GO:0046872
Prci1173g0003 289 SUPERFAMILY Ankyrin repeat 198 267 IPR036770 -
Prci1173g0003 289 ProSiteProfiles Ankyrin repeat region circular profile. 225 256 - -
Prci1173g0003 289 SUPERFAMILY FYVE/PHD zinc finger 9 67 IPR011011 -
Prci1173g0003 289 Pfam Ankyrin repeats (many copies) 198 242 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1173g0003 203 263 MAP Kinase Kinase Kinase AT4G18950 39.344 4.31e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1173g0003 - - gmx:100814367 439.113