Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1173g0002 ATGTCTGCAATTGCAGCTTCAACACCTTCAGGAGACGGATCTGGGAAGCATGACCCACAGCTTTCTTCGGATGGAACAAATAACATTACAAATGTAATTTCCAAACTAGACATCGACGCAGATGTAAATTCTAAGACAGCATCAAGAGCAGAGAGTAAGGTTGCATTAGACATAAAAGAGTGTAAGTGTGGAATGCCTCTTTGCATTTGTGAAGCTCCAGCCCCTTCCTCTGATGCACTGCCCCAGCAGAAGAAAATCACTCCAGTCACAACACCTCTGGCAAACCCTAAACCAAAGAAGTCAGATGTTGTTCCTAAAAGTAAAAGCTCCACATCAAACAGCAAGTTTAGTTCTTTCAATCTTGGTCACGTATCCAGTGGTGCCTCTGATGGTTCCCGGATGGAGTATGAAGCTACTGGAGAGGGTTTGAGAGAAGCAATAAAAAATGGTGACGTTGCTTCTGTCAAGAAACTTCTAAATCAGGGTGTGGATTCAAATTACAGGGACAAGCAAGGACTTTCTTTATTGCATTTGGCTGCTGTCTTCAATCAGACTGATATAGTTTTCATTCTCATGGATGCTGGGGCAAGCCTAGAGTACAAGAATGCACAAGGAGAAACGCCCTTCGATTGTGCGCCAGCTACGTTGCAATACAAAATGCGAAAGAAGATGGAAGAGGGCAAGGCAATGGATGGTCAAAGCATTTGA 708 0.4364 MSAIAASTPSGDGSGKHDPQLSSDGTNNITNVISKLDIDADVNSKTASRAESKVALDIKECKCGMPLCICEAPAPSSDALPQQKKITPVTTPLANPKPKKSDVVPKSKSSTSNSKFSSFNLGHVSSGASDGSRMEYEATGEGLREAIKNGDVASVKKLLNQGVDSNYRDKQGLSLLHLAAVFNQTDIVFILMDAGASLEYKNAQGETPFDCAPATLQYKMRKKMEEGKAMDGQSI 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1173g0002 235 ProSiteProfiles Ankyrin repeat profile. 171 203 IPR002110 GO:0005515
Prci1173g0002 235 SUPERFAMILY Ankyrin repeat 144 213 IPR036770 -
Prci1173g0002 235 Pfam Ankyrin repeats (many copies) 144 188 IPR002110 GO:0005515
Prci1173g0002 235 Gene3D - 123 220 IPR036770 -
Prci1173g0002 235 MobiDBLite consensus disorder prediction 1 28 - -
Prci1173g0002 235 MobiDBLite consensus disorder prediction 87 115 - -
Prci1173g0002 235 ProSiteProfiles Ankyrin repeat region circular profile. 171 202 - -
Prci1173g0002 235 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 27 18 228 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1173g0002 149 209 MAP Kinase Kinase Kinase AT4G18950 39.344 3.09e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1173g0002 - - gmx:100814367 312.768