Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1170g0003 ATGGATACAGATGAGGAGTTGTCAATTGTTCTCGAACTATCTAAAGATGACATTTTCTATGATAAAAAGGAGAAATTACTACAAAGTAAAGGTTTTAGTGCCAAGGAAGTAGTGTGTCTCCGGAGCTTTTCAGAGCCAGGTTGTATGAGTGATACTGTGAAAGTACTGGTTCAGATTGCAAGAATCATACATTTGAATGAGGTGGAACTTTATTTTGCTGATGATGCAAGTACATTAGGGGAATTTTACAGCCCTAGGAATGAGTTAGAGGCTCTCAATTCCATCATTTCCCTCATTGACACATTACTTTCTAGTTGTAAGCATCCTCACACAAATTTACTGCGAGAGTTGCGGACAACAATTCTTGCCTTAATTTCTGATTTTGGGGGCAAGGACAGTTTGGAAGCAAAGGTCGAAAAAGACCACAGATGTGAACAAGAAGAACAACTCTTAGAATGGGGTAAAAGCAATGGCATAAAGACACAATTATGGATAGCATATGTCAAAGGAGCAGGTCGAGGTGGCATAGCAGAAAAGGATCTTAAAGTTGGAGATATTGCTCTAGAAATTCCAGTATCCATTATCATTAATGAGGAGCTTGTGCATGAAACTGATATGTACTGTGCCCTAAAGGAAGTTGATGGCATATCACCTGAGACAATATTGCTATTATGGAGCATGAAAGAGAGGCACAATCAGGATTCAAGATTCAGAGCTTACTTTGACTCGCTCCCAGAAAACTTTAATACTGGGTTGAGCTTTGGTATTGATGCAATCACAACATCAGAAGGAACCTTGCTCTTGGAAGAGATAATGGAAGCAAGACAGCATCTTCATGCTCAGTATGATCAATTATTCCCTACTCTGTGCAATGCTTTTCCTGATATATTTCCACTAAAGCTGTACACGTGGGAGCAATTTCTATGGGCCTGTGAACTCTGGTACTCAAATAGTATGAAGATAATGTTTTCTGATGGGACTTTAAGGACGTGCTTAATTCCTATTGCTGGATTTCTTAATCATTCGTTGTGCCCACACATTCTGCACTATGGCAAAGTAGATCCTGCAACAAATTCATTGAAATTTCCTCTTTCAAGACCATGCAGATCTGGAGAAGAATGCTGTTTAAGCTATGGGAACTTCTCTAATTCTCATCTCATTACCTTTTATGGTTTCTTACCACAAGGAGACAACCCATATGACGTCATCCCACTTGACATTGATGCTTCTGGCGTTGGCTCCTTGGAGGATGAACCCGTTTCCAGCTGGAGCAATCACATGGTGCGGGGTACTTGGCTCTCCAACAACCACAATTTGTACTACTATGGCCTCCCCTCCCCGCTGTTGGACCATTTTCGAAGATGTCGAAATCCCATGTTGCATACAAAGACCTTTTTGCAAGGGGACTTGGAAAATGAGCTGGAAATTCTAGAAGATCTCAGATTTATCTTCGATAACATGATGGACAATTTGGATGACACAAATCTTGATGATAACAGAGAAAACTGCAGTTGGGATGAAAAATTGGCACTGGAGTATAAAATTCTACAAAGACGAATGGTCTCCTCTATCTCAACTTCATGCAATACTGGCATCGACGTGGTCAAGAATGAACTGTATAAGTGCATGGCCGAGGACATCCGAGGGTAG 1650 0.4079 MDTDEELSIVLELSKDDIFYDKKEKLLQSKGFSAKEVVCLRSFSEPGCMSDTVKVLVQIARIIHLNEVELYFADDASTLGEFYSPRNELEALNSIISLIDTLLSSCKHPHTNLLRELRTTILALISDFGGKDSLEAKVEKDHRCEQEEQLLEWGKSNGIKTQLWIAYVKGAGRGGIAEKDLKVGDIALEIPVSIIINEELVHETDMYCALKEVDGISPETILLLWSMKERHNQDSRFRAYFDSLPENFNTGLSFGIDAITTSEGTLLLEEIMEARQHLHAQYDQLFPTLCNAFPDIFPLKLYTWEQFLWACELWYSNSMKIMFSDGTLRTCLIPIAGFLNHSLCPHILHYGKVDPATNSLKFPLSRPCRSGEECCLSYGNFSNSHLITFYGFLPQGDNPYDVIPLDIDASGVGSLEDEPVSSWSNHMVRGTWLSNNHNLYYYGLPSPLLDHFRRCRNPMLHTKTFLQGDLENELEILEDLRFIFDNMMDNLDDTNLDDNRENCSWDEKLALEYKILQRRMVSSISTSCNTGIDVVKNELYKCMAEDIRG 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1170g0003 549 FunFam Transcription factor, E2F and DP-related 145 393 - -
Prci1170g0003 549 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 145 497 - -
Prci1170g0003 549 Gene3D set domain protein methyltransferase, domain 1 144 393 - -
Prci1170g0003 549 Gene3D - 2 119 IPR036464 -
Prci1170g0003 549 Pfam SET domain 172 379 IPR001214 GO:0005515
Prci1170g0003 549 SUPERFAMILY SET domain 146 400 IPR046341 -
Prci1170g0003 549 CDD SET_LSMT 165 393 - -
Prci1170g0003 549 Pfam Rubisco LSMT substrate-binding 15 106 IPR015353 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Prci1170g0003 SET 4.8e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1170g0003 K19199 - gmx:100778605 822.387