Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1159g0004 ATGCCAGAGAATTCGATTTTCCCTGAACACTCCATTCAATACCGGAGCCACACGGAGGAGGATGGTGGTGAGCCTGTCTCTGATGGATGCCAAGACGAGCAGGTAACAGTCTCGGCCGGAGATGTTGACCGGAACATCACCGGTGGTCGGTGGCCTCCAGAGGAGACTAAGGCTTTGCTCAAGATAAGGTCTGATATGGACGCTGCTTTCAGGGATACGTTCCCCAAAGTTCATCTCTGGGAACAAGTTTCCAGCACTAGAAGCATGGTCTTTTTTCTCTGTAGACCCCCATCGAATTCCAGTTTTCCCACTGACTGTTACTCTTTGAAACTGGAGACTAGGGAGCTAGGATATAATAGAAGTGCTAAGAAATGCCAGGAGAAGTTTGAAAACGTGTACAAATACTACAGAAGGACCAAGGAAGGTCGTTATGGCCGACCCAGTGGCAAGACTTACCGATTCTTTGACCTGTTAGAACCCCTTATGAACTCTCCATACCCTGAAAAGTATGAAGAACAAGTGAGAAACACAGAAATAACCACAACCCCAATGGATTTGTCTGATGTTATTATTCAAGGTGCAATTCCACATCCTTACCCTGAAAAGAATGAGGATCAAACGGAAAACATAGCAACAACTACAACCCCTATAGATTTGTCGAATGTTATTCAAGATTTGATTCCACATTTCATTCGATTCTCTGGTGTCCCCTCTGGTTCAACCACTCCCTCTTCGAGCGAAGAATCAGAGGAAAATATTCGGAAGAAGAGGAAACTGACCCAATATTTTGAAAGGTTGATGAACAAAGTACTAGAGAAGCAAACGAAGCTTCAGAAAAACTTTATGGAGATTTTGCTCAAATGTGAACAAGATAGAATGGCAAGAGAGGAAGCATGGAAGACGCAAGAATTAGCTAGGATTAAGAGGGAGCGAGAGCTTTTGGCTGAAGAAAGATCAATTGCTGCGGCAAAAGATGCTGCAGTGCTTGCCCTTCTGAGGAAGTTCGCAGGACATACAGGATCCACAGAATTACCCGAGAACCTACTTCCTGTTGATATAGATAAGGACGAGCAAGAAAATGATAATGCTGGTAGTAGTGCTGTTGAAAAGCAAGACTGTAGAAATGGTGGGAATTTCACACTGACGAGTCCATCTTCCTCACGATGGCCCAAAGATGAAGTGGAAGCATTGATTAGATTGAGGACAAACTTTGATGTGGAGAATGAAGGAAATGGGCTTAAAGGATCTATTCCTATATGGGAGGAGATATCTTGTTCAATGAAAAAACTTGGGTACGATCGGAGTGCCAGGAGATGCAAAGAGAAATGGGAGAATATGAACAAATACTTCAAGAGGATGAAGAAGAAAAACCAGAAAAAGCCTCAGAGTTCTAAAACATGTCCTTATTTTCAACAGCTTGATGCTCTGTATAATAGTGAAAAGCCTAATGAGACGGTGGAGGATTCAGCCAGTTCTGATAAGGATCAACTGAAACCCGAGGAGCTACCAATACATCTTATGGAGGGTCAGTCTCCGTCCTCATCTGACAGAGAAGAAGGATCAGAATGA 1569 0.4347 MPENSIFPEHSIQYRSHTEEDGGEPVSDGCQDEQVTVSAGDVDRNITGGRWPPEETKALLKIRSDMDAAFRDTFPKVHLWEQVSSTRSMVFFLCRPPSNSSFPTDCYSLKLETRELGYNRSAKKCQEKFENVYKYYRRTKEGRYGRPSGKTYRFFDLLEPLMNSPYPEKYEEQVRNTEITTTPMDLSDVIIQGAIPHPYPEKNEDQTENIATTTTPIDLSNVIQDLIPHFIRFSGVPSGSTTPSSSEESEENIRKKRKLTQYFERLMNKVLEKQTKLQKNFMEILLKCEQDRMAREEAWKTQELARIKRERELLAEERSIAAAKDAAVLALLRKFAGHTGSTELPENLLPVDIDKDEQENDNAGSSAVEKQDCRNGGNFTLTSPSSSRWPKDEVEALIRLRTNFDVENEGNGLKGSIPIWEEISCSMKKLGYDRSARRCKEKWENMNKYFKRMKKKNQKKPQSSKTCPYFQQLDALYNSEKPNETVEDSASSDKDQLKPEELPIHLMEGQSPSSSDREEGSE 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1159g0004 522 MobiDBLite consensus disorder prediction 508 522 - -
Prci1159g0004 522 CDD GT1 387 450 - -
Prci1159g0004 522 PANTHER FI21293P1 23 510 - -
Prci1159g0004 522 Pfam Myb/SANT-like DNA-binding domain 50 159 IPR044822 -
Prci1159g0004 522 Pfam Myb/SANT-like DNA-binding domain 387 476 IPR044822 -
Prci1159g0004 522 SUPERFAMILY Homeodomain-like 387 449 IPR009057 -
Prci1159g0004 522 SMART sant 47 135 IPR001005 -
Prci1159g0004 522 SMART sant 385 449 IPR001005 -
Prci1159g0004 522 MobiDBLite consensus disorder prediction 356 387 - -
Prci1159g0004 522 CDD GT1 50 140 - -
Prci1159g0004 522 MobiDBLite consensus disorder prediction 478 522 - -
Prci1159g0004 522 MobiDBLite consensus disorder prediction 234 254 - -
Prci1159g0004 522 MobiDBLite consensus disorder prediction 364 387 - -
Prci1159g0004 522 MobiDBLite consensus disorder prediction 486 502 - -
Prci1159g0004 522 Gene3D - 51 138 - -
Prci1159g0004 522 Gene3D - 389 452 - -
Prci1159g0004 522 MobiDBLite consensus disorder prediction 1 30 - -
Prci1159g0004 522 FunFam Trihelix transcription factor GT-2 389 452 - -
Prci1159g0004 522 ProSiteProfiles Myb-like domain profile. 387 447 IPR001005 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1159g0004 48 478 Trihelix Transcription Factor Family AT1G76890 40.842 6.27e-100 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Prci1159g0004 Myb_DNA-bind_4 3.9e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1159g0004 - - pcin:129299456 1002.66