Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1140g0006 ATGGGCGCTGATCTTAATGCTGAATTATCCAAGAAAACATCACTTTTTGGACTTAAAGCTTGGGAAATAACTGGAATTGCTGTTGGATTGTTTATAGTAGTTATACTCGTGCTCTCTGTTTGCCTTACTTCGCGGAAGAAATCAAGAAAAGCCAAGGATAGGATTCCCCTTAGTCAAATACCAACTGTCTCGAAGGATATTAAGGAAGTGAGGGTTAAGCACGTACCAGCAAATGGATTTGCTCCTCGTGATGGAATTCTTCTCACAATACATGATAAATCCAGTGACAGAGAATCAGACAAAGTTATGGTCCATTTGGGCGTGGGGAAGATGAAAAATGGGGATAATAGCAGTTTTTCCGATTCATTCAATCACTTGGAGATAGATGGAGGTGGATCACAGTCAGTAGAGGAAGGTAGCTCTGGCACTCTTACAGTGTATAAGCACTCTTCATACCCTATAACAGCTCCTTCCCCTCTGTCTGGTCTCCCAGAATTCTCTCACTTGGGTTGGGGCCACTGGTTTACATTGAGGGATCTTGAAATTGCTACGAATCGTTTTTCCAAAGAGAATGTGATTGGTGAGGGTGGCTATGGAGTTGTATATCGGGGACAGCTGATCAATGGGAGTCCAGTGGCAATTAAAAAGATACTCAATAACATCGGTCAAGCAGAGAAAGAATTTAGAGTGGAAGTTGAAGCTATTGGCCATGTACGACATAAGAATTTGGTTCGCCTTTTGGGCTACTGCATTGAGGGGACGCACAGGATGCTAGTCTATGAGTATGTCAATAATGGAAACTTGGAGCAATGGCTCCATGGAGCTATGCGTCATCATGGATATCTTACATGGGAAGCACGAATGAAGATCCTCCTTGGCACGGCCAAAGCTCTTGCATATTTGCATGAAGCCATTGAGCCAAAGGTGGTGCACCGGGATATCAAGTCAAGCAACATATTAGTCGATGATGATTTTAATGCCAAGGTTTCTGATTTTGGCTTGGCCAAACTGCTGGGTGCTGGGAAGAGCCATGTCACAACACGAGTTATGGGAACATTTGGATATGTGGCACCTGAATATGCAAATACTGGTCTTCTAAATGAAAAGAGTGATGTTTATAGCTTCGGTGTTATGCTCTTGGAAGCAATCACAGGAAGAGATCCAGTTGACTATGGTCGACCAACTCATGAAGTTAATCTGGTTGATTGGCTCAAGATGATGGTTGGAAGCAGGCGATCAGAAGAAGTGGTTGACCCATATATTGAGGTGAGGCCCTCCACCAGAGCTTTAAAACGGGCCCTCTTGACTGCCCTGAGATGTGTGGATCCTGATTCCGAGAAGAGACCCAAGATGGGCCAAGTTGTACGGATGCTGGAGTCCCATGAGTACCCTTGGCTAGAGAGGTTCGACCGAAGGCGCCGAAGAAATCAAGGGGAGAGCATGGAAATTGAATCCCAAAAGGAATATTCAGACACAGATGGATCAGAGAGCAGAGGATAA 1500 0.446 MGADLNAELSKKTSLFGLKAWEITGIAVGLFIVVILVLSVCLTSRKKSRKAKDRIPLSQIPTVSKDIKEVRVKHVPANGFAPRDGILLTIHDKSSDRESDKVMVHLGVGKMKNGDNSSFSDSFNHLEIDGGGSQSVEEGSSGTLTVYKHSSYPITAPSPLSGLPEFSHLGWGHWFTLRDLEIATNRFSKENVIGEGGYGVVYRGQLINGSPVAIKKILNNIGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRMLVYEYVNNGNLEQWLHGAMRHHGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILVDDDFNAKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVMLLEAITGRDPVDYGRPTHEVNLVDWLKMMVGSRRSEEVVDPYIEVRPSTRALKRALLTALRCVDPDSEKRPKMGQVVRMLESHEYPWLERFDRRRRRNQGESMEIESQKEYSDTDGSESRG 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1140g0006 499 FunFam Putative receptor-like protein kinase 169 262 - -
Prci1140g0006 499 MobiDBLite consensus disorder prediction 476 499 - -
Prci1140g0006 499 CDD STKc_IRAK 193 459 - -
Prci1140g0006 499 Pfam Protein kinase domain 188 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1140g0006 499 SMART serkin_6 187 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1140g0006 499 ProSitePatterns Protein kinases ATP-binding region signature. 193 216 IPR017441 GO:0005524
Prci1140g0006 499 FunFam Putative receptor-like serine/threonine-protein kinase 263 475 - -
Prci1140g0006 499 Gene3D Transferase(Phosphotransferase) domain 1 263 473 - -
Prci1140g0006 499 ProSiteProfiles Protein kinase domain profile. 187 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1140g0006 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 309 321 IPR008271 GO:0004672|GO:0006468
Prci1140g0006 499 Gene3D Phosphorylase Kinase; domain 1 169 262 - -
Prci1140g0006 499 SUPERFAMILY Protein kinase-like (PK-like) 171 469 IPR011009 -
Prci1140g0006 499 PANTHER OS01G0323000 PROTEIN 5 488 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1140g0006 17 460 Trihelix Transcription Factor Family AT1G70460 39.644 1.39e-91 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Prci1140g0006 Pkinase 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1140g0006 - - qsa:O6P43_007383 861.677