Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1140g0004 ATGGGCGCTGATCTTAATGCTGAATTATCCAAGAAAACATCACTTTTTGGACTTAAAGCTTGGGAAATAACTGGAATTGCTGTTGGATTGTTTATAGTAGTTATACTCGTGCTCTCTGTTTGCCTTACTTCGCGGAAGAAATCAAGAAAAGCCAAGGATAGGATTCCCCTTAGTCAAATACCAACTGTCTCGAAGGATATTAAGGAAGTGAGGGTTAAGCACGTACCAGCAAATGGATTTGCTCCTCGTGATGGAATTCTTCTCACAATACATGATAAATCCAGTGACAGAGAATCAGACAAAGTTATGGTCCATTTGGGCGTGGGGAAGATGAAAAATGGGGATAATAGCAGTTTTTCCGATTCATTCAATCACTTGGAGATAGATGGAGGTGGATCACAGTCAGTAGAGGAAGGTAGCTCTGGCACTCTTACAGTGTATAAGCACTCTTCATACCCTATAACAGCTCCTTCCCCTCTGTCTGGTCTCCCAGAATTCTCTCACTTGGGTTGGGGCCACTGGTTTACATTGAGGGATCTTGAAATTGCTACGAATCGTTTTTCCAAAGAGAATGTGATTGGTGAGGGTGGCTATGGAGTTGTATATCGGGGACAGCTGATCAATGGGAGTCCAGTGGCAATTAAAAAGATACTCAATAACATCAGCGGTCAAGCAGAGAAAGAATTTAGAGTGGAAGTTGAAGCTATTGGCCATGTACGACATAAGAATTTGGTTCGCCTTTTGGGCTACTGCATTGAGGGGACGCACAGGATGCTAGTCTATGAGTATGTCAATAATGGAAACTTGGAGCAATGGCTCCATGGAGCTATGCGTCATCATGGATATCTTACATGGGAAGCACGAATGAAGATCCTCCTTGGCACGGCCAAAGCTCTTGCATATTTGCATGAAGCCATTGAGCCAAAGGTGGTGCACCGGGATATCAAGTCAAGCAACATATTAGTCGATGATGATTTTAATGCCAAGGTTTCTGATTTTGGCTTGGCCAAACTGCTGGGTGCTGGGAAGAGCCATGTCACAACACGAGTTATGGGAACATTTGGATATGTGGCACCTGAATATGCAAATACTGGTCTTCTAAATGAAAAGAGTGATGTTTATAGCTTCGGTGTTATGCTCTTGGAAGCAATCACAGGAAGAGATCCAGTTGACTATGGTCGACCAACTCATGAAGTTAATCTGGTTGATTGGCTCAAGATGATGGTTGGAAGCAGGCGATCAGAAGAAGTGGTTGACCCATATATTGAGGTGAGGCCCTCCACCAGAGCTTTAAAACGGGCCCTCTTGACTGCCCTGAGATGTGTGGATCCTGATTCCGAGAAGAGACCCAAGATGGGCCAAGTTGTACGGATGCTGGAGTCCCATGAGTACCCTTGGCTAGAGAGGACCGAAGGCGCCGAAGAAATCAAGGGGAGAGCATGGAAATTGAATCCCAAAAGGAATATTCAGACACAGATGGATCAGAGAGCAGAGGATAACCTCAGAGCAGACATAACCAAAACACCGATTCTTTTTTAG 1539 0.4451 MGADLNAELSKKTSLFGLKAWEITGIAVGLFIVVILVLSVCLTSRKKSRKAKDRIPLSQIPTVSKDIKEVRVKHVPANGFAPRDGILLTIHDKSSDRESDKVMVHLGVGKMKNGDNSSFSDSFNHLEIDGGGSQSVEEGSSGTLTVYKHSSYPITAPSPLSGLPEFSHLGWGHWFTLRDLEIATNRFSKENVIGEGGYGVVYRGQLINGSPVAIKKILNNISGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRMLVYEYVNNGNLEQWLHGAMRHHGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILVDDDFNAKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVMLLEAITGRDPVDYGRPTHEVNLVDWLKMMVGSRRSEEVVDPYIEVRPSTRALKRALLTALRCVDPDSEKRPKMGQVVRMLESHEYPWLERTEGAEEIKGRAWKLNPKRNIQTQMDQRAEDNLRADITKTPILF 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1140g0004 512 Gene3D Phosphorylase Kinase; domain 1 169 263 - -
Prci1140g0004 512 CDD STKc_IRAK 193 460 - -
Prci1140g0004 512 FunFam Putative receptor-like serine/threonine-protein kinase 264 474 - -
Prci1140g0004 512 ProSitePatterns Serine/Threonine protein kinases active-site signature. 310 322 IPR008271 GO:0004672|GO:0006468
Prci1140g0004 512 PANTHER OS01G0323000 PROTEIN 5 480 - -
Prci1140g0004 512 Pfam Protein kinase domain 188 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1140g0004 512 ProSitePatterns Protein kinases ATP-binding region signature. 193 216 IPR017441 GO:0005524
Prci1140g0004 512 SUPERFAMILY Protein kinase-like (PK-like) 171 468 IPR011009 -
Prci1140g0004 512 SMART serkin_6 187 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1140g0004 512 Gene3D Transferase(Phosphotransferase) domain 1 264 475 - -
Prci1140g0004 512 FunFam Putative receptor-like protein kinase 169 263 - -
Prci1140g0004 512 ProSiteProfiles Protein kinase domain profile. 187 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1140g0004 17 461 Trihelix Transcription Factor Family AT1G70460 40.000 9.96e-91 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Prci1140g0004 Pkinase 5.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1140g0004 - - qsa:O6P43_007383 817.379