Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1140g0002 ATGGGCGCTGATCTTAATGCTGAATTATCCAAGAAAACATCACTTTTTGGACTTAAAGCTTGGGAAATAACTGGAATTGCTGTTGGATTGTTTATAGTAGTTATACTCGTGCTCTCTGTTTGCCTTACTTCGCGGAAGAAATCAAGAAAAGCCAAGGATAGGATTCCCCTTAGTCAAATACCAACTGTCTCGAAGGATATTAAGGAAGTGAGGGTTAAGCACGTACCAGCAAATGGATTTGCTCCTCGTGATGGAATTCTTCTCACAATACATGATAAATCCAGTGACAGAGAATCAGACAAAGTTATGGTCCATTTGGGCGTGGGGAAGATGAAAAATGGGGATAATAGCAGTTTTTCCGATTCATTCAATCACTTGGAGATAGATGGAGGTGGATCACAGTCAGTAGAGGAAGAATTCTCTCACTTGGGTTGGGGCCACTGGTTTACATTGAGGGATCTTGAAATTGCTACGAATCGTTTTTCCAAAGAGAATGTGATTGGTGAGGGTGGCTATGGAGTTGTATATCGGGGACAGCTGATCAATGGGAGTCCAGTGGCAATTAAAAAGATACTCAATAACATCAGCGGTCAAGCAGAGAAAGAATTTAGAGTGGAAGTTGAAGCTATTGGCCATGTACGACATAAGAATTTGGTTCGCCTTTTGGGCTACTGCATTGAGGGGACGCACAGGATGCTAGTCTATGAGTATGTCAATAATGGAAACTTGGAGCAATGGCTCCATGGAGCTATGCGTCATCATGGATATCTTACATGGGAAGCACGAATGAAGATCCTCCTTGGCACGGCCAAAGCTCTTGCATATTTGCATGAAGCCATTGAGCCAAAGGTGGTGCACCGGGATATCAAGTCAAGCAACATATTAGTCGATGATGATTTTAATGCCAAGGTTTCTGATTTTGGCTTGGCCAAACTGCTGGGTGCTGGGAAGAGCCATGTCACAACACGAGTTATGGGAACATTTGGATATGTGGCACCTGAATATGCAAATACTGGTCTTCTAAATGAAAAGAGTGATGTTTATAGCTTCGGTGTTATGCTCTTGGAAGCAATCACAGGAAGAGATCCAGTTGACTATGGTCGACCAACTCATGAAGTTAATCTGGTTGATTGGCTCAAGATGATGGTTGGAAGCAGGCGATCAGAAGAAGTGGTTGACCCATATATTGAGGTGAGGCCCTCCACCAGAGCTTTAAAACGGGCCCTCTTGACTGCCCTGAGATGTGTGGATCCTGATTCCGAGAAGAGACCCAAGATGGGCCAAGTTGTACGGATGCTGGAGTCCCATGAGTACCCTTGGCTAGAGAGGACCGAAGGCGCCGAAGAAATCAAGGGGAGAGCATGGAAATTGAATCCCAAAAGGAATATTCAGACACAGATGGATCAGAGAGCAGAGGATAACCTCAGAGCAGACATAACCAAAACACCGATTCTTTTTTAG 1461 0.4422 MGADLNAELSKKTSLFGLKAWEITGIAVGLFIVVILVLSVCLTSRKKSRKAKDRIPLSQIPTVSKDIKEVRVKHVPANGFAPRDGILLTIHDKSSDRESDKVMVHLGVGKMKNGDNSSFSDSFNHLEIDGGGSQSVEEEFSHLGWGHWFTLRDLEIATNRFSKENVIGEGGYGVVYRGQLINGSPVAIKKILNNISGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRMLVYEYVNNGNLEQWLHGAMRHHGYLTWEARMKILLGTAKALAYLHEAIEPKVVHRDIKSSNILVDDDFNAKVSDFGLAKLLGAGKSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVMLLEAITGRDPVDYGRPTHEVNLVDWLKMMVGSRRSEEVVDPYIEVRPSTRALKRALLTALRCVDPDSEKRPKMGQVVRMLESHEYPWLERTEGAEEIKGRAWKLNPKRNIQTQMDQRAEDNLRADITKTPILF 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1140g0002 486 CDD STKc_IRAK 167 434 - -
Prci1140g0002 486 Pfam Protein kinase domain 162 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1140g0002 486 FunFam Putative receptor-like serine/threonine-protein kinase 238 448 - -
Prci1140g0002 486 ProSiteProfiles Protein kinase domain profile. 161 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1140g0002 486 SUPERFAMILY Protein kinase-like (PK-like) 145 442 IPR011009 -
Prci1140g0002 486 SMART serkin_6 161 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1140g0002 486 FunFam Putative receptor-like protein kinase 143 237 - -
Prci1140g0002 486 PANTHER OS01G0323000 PROTEIN 5 454 - -
Prci1140g0002 486 ProSitePatterns Protein kinases ATP-binding region signature. 167 190 IPR017441 GO:0005524
Prci1140g0002 486 ProSitePatterns Serine/Threonine protein kinases active-site signature. 284 296 IPR008271 GO:0004672|GO:0006468
Prci1140g0002 486 Gene3D Phosphorylase Kinase; domain 1 133 237 - -
Prci1140g0002 486 Gene3D Transferase(Phosphotransferase) domain 1 238 449 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1140g0002 17 435 Trihelix Transcription Factor Family AT1G70460 41.882 5.54e-93 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Prci1140g0002 Pkinase 5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1140g0002 - - qsa:O6P43_007383 768.844