Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci113g0004 ATGCTTCGCCGGGAAAACTCATTGATGTATCTTCACCTTCTCATCCTAGTGATTATTTCTCCCCTGTTCTTCAGCTGCATCGTCGTGTTTGCAGAAACCAACACTCTGAATCAATCCGACTCACTCAACTTCACCGGTCGCTTGGTTTCCAACAACCAGAATTTCACCCTAGAATTCGTCAAACCTATTCCCTTCAGCAACAACACTTACTTGGCCATCTGGAATTCGTACGAATCATCCTCGTACCCTGTTTGGCTAGCCAACAGAGACAACCCAATCACTGACGGTTCTGCAACTCTCTTCATCGACAACACCGGAAAGTTTGTGATCAATCAGACTCATGGTGACCCAATTCAATTGTGCCCTGGCGAAGCCGCGACCAACAGCACCACCAACACAAAGGCTGTGTTGCTCGACAATGGAAATCTTGTACTGACAGAAGTGAATTCCGATGGATCTGTCGGGAGAACCTTGTGGCAGAGCTTTGACTGTCCCACTGACCATCTGTTACCTGGCATGAAACTAGGGATCAATCACAGAACAGGAAGAAATTGGTCTCTCACTTCATGGCTGGCCTATGATGATCCATCTCCAGGAGCTTTCACACTCGAATGGGACCCTCATGGCTTAGAGTTAGTTCTTCGGCGAAGAGGGGTTGTTTTCTGGACCAGTGGTGGAACAACCTTGGGAAACATAGAACAATTGTCCCATAAAATACAATCTTATGAAATGTCATATACCAAAACTTCAGATGAAGAGTTCTTCAATTATTCACTGAAACAAGACCCTATGGATCCTGGGATTCATGAAAGCATAGAATGGATCTTAGATTACGAAGGTAGTATTTGGTTTAACAACGAGGAAGTGGCATTACAGGATTATTGTTATGGGTACGAGGAAGATGTGGGATGTGCAAAATGGGAACAGCTAGAGTGTAGGAGTGAGAATACGAGATTTGAGCTATTGTCTGGGTACTTTGTGAGTAAGAGAAATGGAAAATTCATTGATGGTGAGAGTGAAAGCATTGGGCCTGCTGATTGTAGAGCTAGTTGTTGGAATGACTGTAATTGTCAAGCATATCTCAAGAGCCGCAGCGTAGGTTGTGTCACATATCATCAAGAAGCAGAGTTCCAACTAGACCCATCTGGGAATTCGCAACAACATTATGTTATCCAACAATCACAAAACAAAGGAAGGGACACAAAGAAAAGGATTGCAATTTCAGTTCCGATTTCATTGTTGTCAGTGTCTGTCATTGTCATTATCTTGTATCGGAGATGGAAAACAAAAGGGAGAAAAGAAGACCATCTACATCAATCGGAAACAACAAGCAGTAATTTGCACGATCCAAATGAGCTTGGATACGATGATGGCTTTTCTCAACATTTGAAAATGTTTACCTTTGTCTCTATTGTTGAAGCTACAGATGACTTTTCTGTACAAAATAAGCTTGGAGAAGGTGGTTTTGGCCCAGTTTATAAGGGAAAACTACCTGAAGGGGTAGAAATTGCAGTGAAAAGGCTATCAAGGAGTTCAGGACAAGGATTGGTGGAGTTTAAGAATGAATTGATACTCATAGCAAAACTACAACACAAGAATCTAGTACGTTTACTTGGATGCTGCATGCAATCTGAGGAAAAGATGTTAGTTTATGAATACATGCCCAATAAAAGTCTAGACTCCTTTCTCTTTGATGCATCCAAGAGGGCGGCATTAAATTGGAAAATTAGAGTGATGATTATTGAAGGGATTTCACAAGGACTTCTTTACCTTCATCAACATTCAAGATTAAGAATCATACACAGAGATTTGAAAACCAGTAACATATTACTTGATATAGACATGAATCCTAAAATTTCTGATTTTGGAATGGCAAGAATTTTCAAGGAGAATGAGTTCATAGCCAAGACGAACAGAATTGTTGGGACATAG 1932 0.4125 MLRRENSLMYLHLLILVIISPLFFSCIVVFAETNTLNQSDSLNFTGRLVSNNQNFTLEFVKPIPFSNNTYLAIWNSYESSSYPVWLANRDNPITDGSATLFIDNTGKFVINQTHGDPIQLCPGEAATNSTTNTKAVLLDNGNLVLTEVNSDGSVGRTLWQSFDCPTDHLLPGMKLGINHRTGRNWSLTSWLAYDDPSPGAFTLEWDPHGLELVLRRRGVVFWTSGGTTLGNIEQLSHKIQSYEMSYTKTSDEEFFNYSLKQDPMDPGIHESIEWILDYEGSIWFNNEEVALQDYCYGYEEDVGCAKWEQLECRSENTRFELLSGYFVSKRNGKFIDGESESIGPADCRASCWNDCNCQAYLKSRSVGCVTYHQEAEFQLDPSGNSQQHYVIQQSQNKGRDTKKRIAISVPISLLSVSVIVIILYRRWKTKGRKEDHLHQSETTSSNLHDPNELGYDDGFSQHLKMFTFVSIVEATDDFSVQNKLGEGGFGPVYKGKLPEGVEIAVKRLSRSSGQGLVEFKNELILIAKLQHKNLVRLLGCCMQSEEKMLVYEYMPNKSLDSFLFDASKRAALNWKIRVMIIEGISQGLLYLHQHSRLRIIHRDLKTSNILLDIDMNPKISDFGMARIFKENEFIAKTNRIVGT 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci113g0004 643 Gene3D - 27 163 IPR036426 -
Prci113g0004 643 Pfam PAN-like domain 340 374 IPR003609 -
Prci113g0004 643 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 196 IPR036426 -
Prci113g0004 643 Gene3D Transferase(Phosphotransferase) domain 1 554 643 - -
Prci113g0004 643 SUPERFAMILY Protein kinase-like (PK-like) 456 643 IPR011009 -
Prci113g0004 643 Pfam Protein tyrosine and serine/threonine kinase 480 632 IPR001245 GO:0004672|GO:0006468
Prci113g0004 643 Pfam D-mannose binding lectin 84 190 IPR001480 -
Prci113g0004 643 SMART serkin_6 478 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci113g0004 643 ProSiteProfiles Bulb-type lectin domain profile. 33 158 IPR001480 -
Prci113g0004 643 ProSiteProfiles PAN/Apple domain profile. 312 394 IPR003609 -
Prci113g0004 643 CDD B_lectin 48 165 IPR001480 -
Prci113g0004 643 SMART blect_4 33 165 IPR001480 -
Prci113g0004 643 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Prci113g0004 643 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 554 643 - -
Prci113g0004 643 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 443 553 - -
Prci113g0004 643 ProSiteProfiles Protein kinase domain profile. 478 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci113g0004 643 Gene3D Phosphorylase Kinase; domain 1 455 553 - -
Prci113g0004 643 ProSitePatterns Serine/Threonine protein kinases active-site signature. 599 611 IPR008271 GO:0004672|GO:0006468
Prci113g0004 643 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 22 633 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci113g0004 398 643 Receptor kinase-like Gene Family AT4G04500 51.600 1.84e-76 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci113g0004 PK_Tyr_Ser-Thr 2.1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci113g0004 - - pcin:129322789 987.638