Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1138g0001 ATGGTTCCCCTGATAAATCTCCAGCTTGTCCTGCGCTTCATTCTGCCGCGCCTGCACAATCACAATATTTCGGCAGAGTCATCCTTCAGAGAAGAGGTTATTGTCGCTGCCGAGACAGTGCCACCAATTGCAGGTGAGCCAATGGACATCATGACTGCCTTGCAGCTTGTGCTGAGAAAATCAATGGCTTATGGTGGTCTTGCTCGAGGCCTTCATGAAGGTGCTAAGGTTATCGAGAAGCACGCTGCACAGCTCTGCGTTCTTGCCGAGGACTGTGACCAACCCGACTATGTAAAACTTGTGAAAGCCCTCTGTGCTGAGCACAATGTTAGCTTGCTGACAGTTCCAAATGCAAAAAGCCTTGGAGAGTGGGCCGGTTTGTGTAAGATCGACTCAGAAGGAAAGGCTAGAAAGGTGGTCGGTTGCTCCTGCGTGGTTGTCGAGGATTTCGGGGAGGAACATGAAGCCTATAACGTTGTGTTGCAGCATGTTAAATCTCACTGA 504 0.5 MVPLINLQLVLRFILPRLHNHNISAESSFREEVIVAAETVPPIAGEPMDIMTALQLVLRKSMAYGGLARGLHEGAKVIEKHAAQLCVLAEDCDQPDYVKLVKALCAEHNVSLLTVPNAKSLGEWAGLCKIDSEGKARKVVGCSCVVVEDFGEEHEAYNVVLQHVKSH 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1138g0001 167 SUPERFAMILY L30e-like 47 165 IPR029064 -
Prci1138g0001 167 PRINTS Ribosomal protein S12E family signature 112 133 IPR000530 GO:0003735|GO:0005840|GO:0006412
Prci1138g0001 167 PRINTS Ribosomal protein S12E family signature 57 70 IPR000530 GO:0003735|GO:0005840|GO:0006412
Prci1138g0001 167 PRINTS Ribosomal protein S12E family signature 71 87 IPR000530 GO:0003735|GO:0005840|GO:0006412
Prci1138g0001 167 PRINTS Ribosomal protein S12E family signature 137 150 IPR000530 GO:0003735|GO:0005840|GO:0006412
Prci1138g0001 167 PANTHER 40S RIBOSOMAL PROTEIN S12 42 167 - -
Prci1138g0001 167 FunFam 40S ribosomal protein S12 33 167 - -
Prci1138g0001 167 Pfam Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 53 146 IPR004038 -
Prci1138g0001 167 Gene3D - 34 167 IPR029064 -
Prci1138g0001 167 ProSitePatterns Ribosomal protein S12e signature. 53 71 IPR000530 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1138g0001 46 167 Cytoplasmic Ribosomal Protein Gene Family AT2G32060 72.951 5.55e-65 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1138g0001 K02951 - gmx:100305687 252.677