Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1123g0004 ATGATAATGGGGAGGGACAAGAACAGTAGTAGTAAGAACAATAACAACGTTGTGAAGCTAAGGAAGGGGTTGTGGTCGCCGGAGGAGGATGAGAAGCTGATGAGGTACATGTTGACCAATGGACAAGGTTGTTGGAGTGATATTGCCAGAAATGCAGGACTTCAGAGGTGTGGCAAAAGTTGTCGCCTTCGTTGGATTAATTATCTCAGACCTGACCTCAAGAGGGGCGCTTTCTCTCTCCAAGAAGAACAGCTCATTCTTCATTTTCATTCCATTCTTGGCAATAGGTGGTCTCAGATAGCAGCACGTCTTCCAGGACGCACAGACAATGAAATTAAGAACTTCTGGAACTCTACTTTAAAGAAAAGGATGAAAAACAACAACAATAATACTGCTACTACTACTTCCACTGCTACTCCTTCACCAAACAACAGCACAGACTCATCATCAAATCATATTGTTCTCAACGGGATCACCACCACAGCCTCCATGCCCTTCATCAATAAGCAAGATCTCATCAACATGACCTTGTGCATGGACTCATCACCTTCATCAATATCATCATCTTCATCGGCGTCCGTACAATCCATACAGGCCATGGCTTTCGGTGGTGATCAAAGGTTGATGGAGTATCCCTTTTCCATGTTGGATAATAACAGTAATATTCCTTATGACATGCCTGCATGCTTAACACAAGTTGGTTGTGGTAGTGGCGGCATGGTCCAGGATGGGATTTATGGGGATGATTATAATAATGGGTTGGTATTTGAGGGAGAGGATAATAAAGTAATGGGGTTAGAAAGAGACCTGTGTCTTCCTTCTCTAGAGAGTAGAAGCATGGAAGAGAAGTATAATAGTAGTGCTGTTCCTATTGATGTGAAAGGTCATATCAACAACAACAACAACAACAACCATTTTAATAATGGTTGCTTCAATGACACTGATCATCAGTACCACCACCATCATCATCAGGACTTGGTTGGGTTTGGAAATAATAATCATGGGCAATCAGGGGAAAACTTAAGAATGGGAGAATGGGATTTGGAGGGTTTAATGCAAGATATATCCTCTTTTCCTTTCCTTGATTTCCAAGTTGAATGA 1101 0.4196 MIMGRDKNSSSKNNNNVVKLRKGLWSPEEDEKLMRYMLTNGQGCWSDIARNAGLQRCGKSCRLRWINYLRPDLKRGAFSLQEEQLILHFHSILGNRWSQIAARLPGRTDNEIKNFWNSTLKKRMKNNNNNTATTTSTATPSPNNSTDSSSNHIVLNGITTTASMPFINKQDLINMTLCMDSSPSSISSSSSASVQSIQAMAFGGDQRLMEYPFSMLDNNSNIPYDMPACLTQVGCGSGGMVQDGIYGDDYNNGLVFEGEDNKVMGLERDLCLPSLESRSMEEKYNSSAVPIDVKGHINNNNNNNHFNNGCFNDTDHQYHHHHHQDLVGFGNNNHGQSGENLRMGEWDLEGLMQDISSFPFLDFQVE 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1123g0004 366 MobiDBLite consensus disorder prediction 123 150 - -
Prci1123g0004 366 CDD SANT 77 120 IPR001005 -
Prci1123g0004 366 Gene3D - 76 149 - -
Prci1123g0004 366 ProSiteProfiles Myb-like domain profile. 70 120 IPR001005 -
Prci1123g0004 366 Gene3D - 19 75 - -
Prci1123g0004 366 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 69 IPR017930 -
Prci1123g0004 366 PANTHER MYB DOMAIN PROTEIN 55 11 317 - -
Prci1123g0004 366 SUPERFAMILY Homeodomain-like 20 116 IPR009057 -
Prci1123g0004 366 CDD SANT 25 69 IPR001005 -
Prci1123g0004 366 Pfam Myb-like DNA-binding domain 25 85 - -
Prci1123g0004 366 SMART sant 21 71 IPR001005 -
Prci1123g0004 366 SMART sant 74 122 IPR001005 -
Prci1123g0004 366 FunFam MYB transcription factor 19 75 - -
Prci1123g0004 366 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 124 IPR017930 -
Prci1123g0004 366 ProSiteProfiles Myb-like domain profile. 17 69 IPR001005 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1123g0004 5 366 MYB Transcription Factor Family AT3G08500 45.380 6.27e-77 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Prci1123g0004 Myb_DNA-bind_6 4.5e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1123g0004 K09422 - zju:107417581 351.673