Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci111g0004 TGGATCAATCTTTGGTACGTCAGCTTCAGGGACTACCTTGGTTCTGACTTCGTGGTGCCTCAGGAAAGGAAGTTCGATGGTGTTTGGCAATTTTACACACCTCATATTGGATTTCACTATGATTCAAGGTTAGGCATAAGGTTGGAAACAATCGCTGAAGTCAAGTTTGGCACGTGGAGGACAGATTCCGAAATAATAGAATCTGATAGATGGATATTCCTTTTTCCTGCCATCGGTGCTAAGGAGCTAGCTTCCACGCGCTGTCGGAAGCTTGCTGACATAGTGAGCAGAGGTGGCGCGTGTGGACCACACGCGCTGCCGTTCGTCGTCGCCGTCTTGGGTTTCGCCGTTCAGAGCCTCTTGAGTACGTCTAGGGTGGCGGGAACAGTTGTGGTTGCTGGTAGGGCAAGAGCAATTGTGGTGGGAGTTGGTCATAACACTGCCATGGGCAGCATACGTGATTCAATGTTGCAAACAGAAGATGAGGTGACACCATTGAAGAAGAAGCTGGATGAGTTTGGTACCTTTTTGGCCAAGGTTATTGCAGGGATTTGCATATTGGTGTGGGTTGTAAATATCGGACACTTTCGTGACCCTTCTCATGGGGGTTTCTTGCAGGGTGCTATTCATTATTTTAAGATTGCTGTTGCTCTGGCAGTTGCGGCAATTCCAGAAGGGCTCCCTGCTGTTGTTACAACCTGTCTAGCTCTTGGAACAAAGCGGATGGCTAGGTTAAATGCTATTGTGCGGTCTTTACCTTCTGTGGAGACATTGGGCTGCACTACTGTAATTTGCAGCGACAAAACTGGAACTTTGACAACCAATATGATGTCTGTGACAAAGATATGTGTGGTTCGCTCCGCAAAACATAGTCCTGTTGTTACTGAATACAATGTTAGCGGAACAACATATGCACCTGAAGGCATGATCTTTGACAGTTCGGGAACACAGCTTGATGTTCCAGCTCGATTGCCATGTCTTCTTCACACAGCAATGTGTTCTGCACTTTGCAATGAGTCCACCCTGCAGTATAACCATGACAAAGGAAAGTATGAAAAAATTGGAGAGTCAACAGAAGTGGCACTTCGTGTCCTGGCGGAGAAAGTTGGTCTCCCTGGTTTTGATTCTATGCCATCAGCCTTGAACATGTTGAGCAAGCATGAGCGGGCATCTTACTGTAATCATTATTGGGAGGAACAATTTAGAAAGATAGATCTGTTGGATTTTTCTCGGGATCGGAAAATGATGAGTGTCCTTTGCAACCGAAATCAGCTTCATGTGTTGTTCTCCAAGGGTGCTCCAGAGAGTATCATGTCTAGATGTACAACCGTCATGTGCAATGACGATGGCTCCCTTGTGCCACTTACTGCTGATATTCGAGCTGAGCTAGACTCAAAGTTCCACAGTTTTGCAGGAAAAGAAACATTGAGATGCCTAGCTTTAGCCCTGAAATGGATGCCTTTGAGTCAACAACGCCTTTCCTATAATGATGAGAAAGATCTTACATTTATTGGGTTGGTTGGAATGCTTGATCCACCAAGAGATGAAGTAAGAAATGCGATGCTTTCATGCATGACCGCTGGCATACGTGTTATAGTTGTTACAGGGGATAACAAGTCAACTGCTGAGTCACTTTGCCGCAAGATAGGGGCTTTTGACCACTTCTTGGAATTTAATGAACATTCTTATACTGCTTCTGAGTTTGAAGAACTTCCAGCTCCGCAGCAAACTCTTGCTTTGCAACGTATGGCTCTTTTTGCCAGGGTTGAGCCATCTCATAAAAGGATGCTGGTTGAAGCATTGCAGCACCAGAATGAAGTGGTTGCTATGACTGGAGACGGTGTCAATGATGCACCTGCACTGAAGAAGGCAGACATAGGAATTGCTATGGGTTCAGGTACAGCTGTTGCCAAGAGTGCTTCAGACATGGTACTGGCTGATGATAACTTTGCTACAATTGTTGCGGCTGTGGCAGAGGGAAGGGCCATATACAACAATACAAAGCAATTCATTAGATACATGATCTCTTCTAATATTGGTGAAGTATTCTGTATATTTGTGGCAGCTGTGCTTGGAATTCCCGATACCCTTGCCCCGGTCCAGCTGCTTTGGGTGAATTTGGTTACTGATGGATTGCCTGCTACTGCTATCGGCTTTAATAAGCCAGATTCTGATGTAATGAAGGCCAAACCTCGTAAGGTGAATGAAGCAGTGGTTACAGGGTGGCTGTTCTTCCGTTATCTAGTAATTGGAGCTTATGTTGGTCTTGCTACTATTGCTGGTTTTATTTGGTGGTTTGTTTCCTCTGACAGCGGCCCAAAACTGCCATATACTGAACTGATGAATTTTGACACTTGCCCAACAAGGCAGACAACTTTCCCATGCAGTATATTTGATGATCGACACCCATCTACTGTAGCAATGACTGTGCTTGTCGTTGTTGAGATGTTCAATGCTTTGAACAATCTTAGCGAAAATCAATCTCTTCTGGTTATCCCTCCATGGAGTAACTTATGGCTTGTTGGTTCAATAATTCTTACCCTGCTTCTTCACATGCTTATTTTGTATGTGCATCCTCTCTCTGTTCTTTTCTCTGTAACACCATTATCCTGGGATGACTGGTTGATTGTCCTGTATCTTTCATTACCTGTTATATTCATTGATGAGGTGCTAAAGTTATTCTCCAGGCGTCCTATTGGCCTGAGGTTCAGATTATGGTTCAGGAGGCCTGATTTACTTCCAAAAAGAGAATTGCGTGATAAGTAA 2766 0.4461 WINLWYVSFRDYLGSDFVVPQERKFDGVWQFYTPHIGFHYDSRLGIRLETIAEVKFGTWRTDSEIIESDRWIFLFPAIGAKELASTRCRKLADIVSRGGACGPHALPFVVAVLGFAVQSLLSTSRVAGTVVVAGRARAIVVGVGHNTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICILVWVVNIGHFRDPSHGGFLQGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVTKICVVRSAKHSPVVTEYNVSGTTYAPEGMIFDSSGTQLDVPARLPCLLHTAMCSALCNESTLQYNHDKGKYEKIGESTEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHYWEEQFRKIDLLDFSRDRKMMSVLCNRNQLHVLFSKGAPESIMSRCTTVMCNDDGSLVPLTADIRAELDSKFHSFAGKETLRCLALALKWMPLSQQRLSYNDEKDLTFIGLVGMLDPPRDEVRNAMLSCMTAGIRVIVVTGDNKSTAESLCRKIGAFDHFLEFNEHSYTASEFEELPAPQQTLALQRMALFARVEPSHKRMLVEALQHQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVFCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPATAIGFNKPDSDVMKAKPRKVNEAVVTGWLFFRYLVIGAYVGLATIAGFIWWFVSSDSGPKLPYTELMNFDTCPTRQTTFPCSIFDDRHPSTVAMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVGSIILTLLLHMLILYVHPLSVLFSVTPLSWDDWLIVLYLSLPVIFIDEVLKLFSRRPIGLRFRLWFRRPDLLPKRELRDK 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci111g0004 921 FunFam Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 606 900 - -
Prci111g0004 921 Pfam Cation transport ATPase (P-type) 335 444 - -
Prci111g0004 921 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 272 509 IPR023299 GO:0000166
Prci111g0004 921 Pfam haloacid dehalogenase-like hydrolase 503 625 - -
Prci111g0004 921 SUPERFAMILY Calcium ATPase, transmembrane domain M 157 897 IPR023298 -
Prci111g0004 921 Gene3D - 158 896 - -
Prci111g0004 921 NCBIfam calcium-translocating P-type ATPase, SERCA-type 127 767 IPR005782 GO:0005388|GO:0006816|GO:0016020
Prci111g0004 921 FunFam Sodium/potassium-transporting ATPase subunit alpha 504 650 - -
Prci111g0004 921 FunFam Calcium-transporting ATPase 275 512 - -
Prci111g0004 921 Pfam Cation transporting ATPase, C-terminus 695 894 IPR006068 -
Prci111g0004 921 FunFam Calcium-transporting ATPase, putative 105 261 - -
Prci111g0004 921 SUPERFAMILY HAD-like 498 659 IPR036412 -
Prci111g0004 921 ProSitePatterns E1-E2 ATPases phosphorylation site. 267 273 IPR018303 -
Prci111g0004 921 NCBIfam HAD-IC family P-type ATPase 582 696 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci111g0004 921 NCBIfam HAD-IC family P-type ATPase 155 290 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci111g0004 921 SFLD C1.7: P-type atpase like 246 663 - -
Prci111g0004 921 PANTHER CALCIUM-TRANSPORTING ATPASE 125 897 - -
Prci111g0004 921 Pfam E1-E2 ATPase 126 244 - -
Prci111g0004 921 PRINTS H+-transporting ATPase (proton pump) signature 583 599 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci111g0004 921 PRINTS H+-transporting ATPase (proton pump) signature 642 667 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci111g0004 921 PRINTS H+-transporting ATPase (proton pump) signature 611 627 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci111g0004 921 SFLD p-type atpase 246 663 IPR044492 -
Prci111g0004 921 PRINTS P-type cation-transporting ATPase superfamily signature 611 630 - -
Prci111g0004 921 PRINTS P-type cation-transporting ATPase superfamily signature 527 537 - -
Prci111g0004 921 PRINTS P-type cation-transporting ATPase superfamily signature 265 279 - -
Prci111g0004 921 PRINTS P-type cation-transporting ATPase superfamily signature 634 646 - -
Prci111g0004 921 PRINTS P-type cation-transporting ATPase superfamily signature 505 516 - -
Prci111g0004 921 Gene3D - 262 655 IPR023214 -
Prci111g0004 921 Gene3D - 275 512 IPR023299 GO:0000166
Prci111g0004 921 Gene3D - 127 157 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci111g0004 127 921 Primary Pumps ATPases(2) AT1G10130 83.019 0.0 1351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci111g0004 K05853 - gmx:100783509 1442.56