Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1119g0001 ATGGCACTTGAAGCTCATGGAGTTGACTACCCTTCAAGCTCTTCTGGCTCAGCCAAGACATGGAAGTATCATGTGTTCTTGGTTTTTCGAGGAGCAGACACTCGTAAAAGCTTTACAGATCACTTGTATTGCACTTTACAACGCAAGGGAATGATAGCTTTCAGGGATGATGAAGAACTTGAGAGGGGACAAGTTATTAAACCAAGTCTATTCCAAGCAATTGAAGAATCTCTTTCTGCAATTGTTGTTCTCTCTCCAAACTATGCTTCTTCCTCCTGGTGCTTGGAAGAGCTCTCAAAGATTCTTCATTTTAAAAAAGAGTTGGGTCTTCATGTATTTCCAATCTTTTACGGTGTCGATCCGTCTGATATCGACTTCAAAGAGGAACGGCCTTCCTTGGCGCTCAAAGTGTTGGGTTCATTTCTTTGCGGAAGAAATACATTAGAATGGAGAGATGCAATAGCTAAATTTAAGAAAGTTCCTCCGAATGACATCTTGAAGATACTTAAAGTTAGTTTTGATGGATTGGAAGATGATGAGATCAAAACTATATTTTTAGATATTGCTTGCTTTTTTAAGGGGATGAACAAAGATTATGTCATGCAAATCTTACAAAAATTAGATTTACATCCAATAATTGGAATAAAAGTTCTGGTTGATAAATCTTTGATAATTATTGATCATCTTCACAATACTTTATGGGTTCATGACATGCTTGGGGAAATGGCTAAGAACATTGTTGTTCAACAATCATCCCATGATGTTGGCAAACGTAATAGGATATGTTCATTGGAGGATGCTAATCATGTTCTAGAAAGCAATACGGGGACAGAAGCAATTCGAGGCATCGTGTTAAGATTAGACAAACCATGTGTCTCCAATTGGGATCCTAAAGCCTTCATAAAGATGAGTAATCTTAGATTACTTATCATAAAAAGTGGTTGGCAACGGCATGCTGATCCTGCTGGTTATTTGAATCTTCCTCGTGGGCTTAAATTCTTTCCAAGTACATTAAAAGTGTTAGAATGGAATCGATGCTGTTTAGATACTTTCCCAGGTCAAGTTCTTAAACAACCACAGGTTTTAGGAAAGCTTAAGCACCTTGATTTAAGCCATTCAAAATATCTAATCAAAACACCAAATTTTGATGAAATCCCTGATCTTGAAATAGTCATTCTTGAAGGTTGTGTAAACCTTGTTGAAGTCCATTCATCTCTTGGATGCCATAAGAATCTTGCCACAGTCAATTTGAGGGGTTGCAAGAGTATTGAAACTCTACCAAGAAAGTTAGAGATGAAATGCCTAAAGACTCTTGTACTCTCAGGCTGTTCAAAAATCAAACGACTTCCTGAATTTGGGAAAAGCATGGAGTGTCTATCCCAACTTGATGTGGAGGAGACTGGTATCACAAAACTACCTCAATCACTTGTCAATTTGACTACTCTTGCCGTTTTAAATCTTATGGATTGCAAAAGTCTGGTATACCTTCCCAATGTGATTCAATATATGAAGTCTATTAGAATTCTCAATTTTTCTGGTTGCTCAAAACTTTCAAGTCTTCCAGAGGTTTCGACTGAAAATGTGACTTTAGAAGCGCTTGATGCTAGTGGAACTGCTATCAAGGAAGTGCCTTCCTCAATTTGTCAGTTGACAAATTTGAAATCACTATCTTTTAGTGGATGCACTGGACAAGAACAATCATCCTCACAAAATTTCTTTTCCAATTTTAGTTGGTTCTCTAGGATTACAAGGCCTTCAATATCCACTGGGTTATTGCTGCCCGCTTCTTTACCAAGTTTATCATCATTAACAAACTTAGATTTAAGTTATTGCAATCTCTGTGATGAGTCCCTTCCTAATGATTTTAATGCATTGTCATCGTTGGAGGTGCTTGATCTACGTGGAAACAATTTTGTTAACCTACCTAGTGGCTTTATCTCTAATCTTTTAAGTCTCTGGGGCGTTTTCTTAAGTCATTGTCCAAGGCTTCAGTCATTGCCACGACTTCCACCAAATATATGTAAGACAGATGCGGCTGATTGTCCTTTAGTGACACCTAAACTTGGTCTACAACAGCTGTGGGAATTGCTTGAACAATTTGAAGATAAGGATGGCTTCATGTCAAAATGGTGGTTCTTTTTACAGATTCCAGGAAGTGAAGTGCCATCATGGTTTTTATAA 2181 0.3769 MALEAHGVDYPSSSSGSAKTWKYHVFLVFRGADTRKSFTDHLYCTLQRKGMIAFRDDEELERGQVIKPSLFQAIEESLSAIVVLSPNYASSSWCLEELSKILHFKKELGLHVFPIFYGVDPSDIDFKEERPSLALKVLGSFLCGRNTLEWRDAIAKFKKVPPNDILKILKVSFDGLEDDEIKTIFLDIACFFKGMNKDYVMQILQKLDLHPIIGIKVLVDKSLIIIDHLHNTLWVHDMLGEMAKNIVVQQSSHDVGKRNRICSLEDANHVLESNTGTEAIRGIVLRLDKPCVSNWDPKAFIKMSNLRLLIIKSGWQRHADPAGYLNLPRGLKFFPSTLKVLEWNRCCLDTFPGQVLKQPQVLGKLKHLDLSHSKYLIKTPNFDEIPDLEIVILEGCVNLVEVHSSLGCHKNLATVNLRGCKSIETLPRKLEMKCLKTLVLSGCSKIKRLPEFGKSMECLSQLDVEETGITKLPQSLVNLTTLAVLNLMDCKSLVYLPNVIQYMKSIRILNFSGCSKLSSLPEVSTENVTLEALDASGTAIKEVPSSICQLTNLKSLSFSGCTGQEQSSSQNFFSNFSWFSRITRPSISTGLLLPASLPSLSSLTNLDLSYCNLCDESLPNDFNALSSLEVLDLRGNNFVNLPSGFISNLLSLWGVFLSHCPRLQSLPRLPPNICKTDAADCPLVTPKLGLQQLWELLEQFEDKDGFMSKWWFFLQIPGSEVPSWFL 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1119g0001 726 Pfam TIR domain 22 162 IPR000157 GO:0007165
Prci1119g0001 726 SUPERFAMILY "Winged helix" DNA-binding domain 164 271 IPR036390 -
Prci1119g0001 726 Gene3D Ribonuclease Inhibitor 455 682 IPR032675 -
Prci1119g0001 726 Gene3D Ribonuclease Inhibitor 283 454 IPR032675 -
Prci1119g0001 726 Gene3D - 15 190 IPR035897 -
Prci1119g0001 726 ProSiteProfiles TIR domain profile. 21 165 IPR000157 GO:0007165
Prci1119g0001 726 SUPERFAMILY L domain-like 292 667 - -
Prci1119g0001 726 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 145 IPR035897 -
Prci1119g0001 726 SMART LRR_typ_2 456 479 IPR003591 -
Prci1119g0001 726 SMART LRR_typ_2 600 624 IPR003591 -
Prci1119g0001 726 SMART LRR_typ_2 625 648 IPR003591 -
Prci1119g0001 726 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 443 570 IPR044974 GO:0006952
Prci1119g0001 726 SMART till_3 22 160 IPR000157 GO:0007165
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1119g0001 149 558 WRKY Transcription Factor Family AT4G12020 33.716 3.71e-54 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1119g0001 - - pcin:129299341 1422.14