Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1113g0001 ATGAAACTAAACTTGAATCTCAATTTGTTCCTGAGTTTGATGTGGCTGTCCTTACATTCCACAGATGCAATTACGTACAGAGAAACGTTGGGGATGGGCCAATTACTGGGAACCTCAGATACTTTGGTGTCTGCTAACGGGAACTTCGAACTGGGGTTTTTCGCTCGTGAGAATTCGACCAAGTACTATGTAGGGATGTGGTTTAAGAAAGTTCCTAAAGATAACATTGTTTGGGTTGCGAATAGAAAGCTCGCCACCAGCGATTCCAATGCCGTTCTCACTGTTAATGAGGAAGGAAATCTTGTTGTTAAGAATGAAGGAATGGTATACTTCGTCACCAACATTTCCGGTGTCAGCAATACCCATGCTCTGCTCTTGGATTCAGGTAATCTCCTGCTGATGAACAACTCCAAGTTGAACATTTTGTGGCAAAGTTTCGACAATCCCACGAATACCCTTTTGCCTGGAATGAAGGTAGGATTTGACTCAGAATTAGAAATCAGTTGGTCATTGAGATCGTGGACAAGTGTAGAAGACCCAAGTCCTGGAAATTTCTCTCTTGAAGTTGACACTTCCAATTGGAGGCAGAGGCTAATAATCAGGAGGAAGTCTGAGATATACTGGGTTGGCGATGAACTATCTAATTTCACGTTTCAAAGTTCTAATAACCGAGACGGTGCTATATGGGACTTGGGCTATTTAACTTGGCAGGGGGACTATTCTTCTCGATTGGTTCTGGAAGTTTCTGGAGAGCTTAACCAGCAATTATGGTCACAAGACACCATGCAGTGGGTTTCTTTGCTGTCATCCAAGTGCGGGAGAAACGCAACCTGTGGAAATTTTGGCATTTGCAACCCGCAAGCCACGGACCCTTGTGAGTGCCTCCGCGGATTTAAGCCGTACGATGAAGATTCTTGGAAGAAAGGGGACACATCCGCAGGTTGCGTGAGGAAAAATGAGTTATGCAGTAACATGAGCAGCAATGGATTGGGTGACGGGTTTTTACCAGTCGATAGAGTGGATTTTCCTTTAGACAGTCCGCTTGCCTTCAAGACTGAGAACGCTTTAACATGTCAAAAAGATTGCTCAATCAATTGTTCTTGCGTCGCTTATGCTTACGATGTTATGGGTCGTTGCTTGTTCTGGCTTGATCGAGTGTTGAATCTGAAGAACATCTCGGTTGATCTTAGAGATGATAATTCTAGACCAAGTTTCCACCTCAAACTGGCTCGCTCTGAGTTGATTGACAATGAGTTGAATACAGAAAAGAATCCTGATCATAAGTCTAATCAGAGCCAGAAAGTGGTGCTAACAATTGTCGTAGTTATCTCATTTCTTTCGTTGTTTACACTAGTCCTATTTGCATACTACTGCTGGACGAGAAAGCTTGGGAGAGAAGCGGAGGATCTGCTATTGTTTGATACAGGCATGAGCATGAAAGTTGAGATCTCAGAGCTTAGCGATGTCGATAAGGTTGGGAGAGTTAACAAGAGGGATGTCAAATTGCCATTGTTTAGCTTTGCAAGCGTTTCTGCAGCAACTAATAACTTTTCACCTGAAAATAAGCTTGGTGAGGGTGGCTTTGGACCTGTTTACAAAGGTAAGCTGTTGAATGGGGGTGAGGTTGCTGTGAAAAGGCTATCTGCAAAATCTGGTCAAGGATGGGAGGAGTTGAAAAATGAAGCATTGCTCATTGCAAAACTCCAACACAACAATCTTGTTAGGCTTTTGGGTTGTTGCATTGAACGTGATGAAAAGATGCTGATTTATGAATTCATGCCAAACAAAAGCTTGGATTTTTTCCTTTTTGATGCAACAAAACGCCAGATTTTGGATTGGGAAACCCGAGTTCGAATAATTGATGGGATTGCTCAAGGTCTTCTCTATCTTCATCAGTATTCTAGGTTTTGAATCATTCATAGAGATCTAAAAGCCAGCAATATCTTGTTGGACATCAACATGAATTCTAAAATATCAGATTTTGGAATGGCAAGATTATTTGGTAGAAATGAATTACAAGCAAATACCAACCGGATAGTTGGTACTTATGGTTATATGTCTCCTGAATATGCATTGGAAGGTATTTTCTCAATAAAATCAGATGTGTTTAGCTTCGGAGTCCTTTTGTTGGAGATAATAAGTGGGAAAAAGAATACTGGTTTGTATAAAACAAACTCCCTCAATCTTCTCGGATATGCATGGGACCTATGGACAAGTGGGAGAGGAACAGAGCTGATGGATTCAGCATTAGAAGGTGCATCCATAAAGAAAATGGTGTTACTAAGATACGTGAATATAGCACTGCTTTGTGTTCAAGAAAGTGCAGAAGACAGACCGACCATGTTTGATGTTGTTTCAATGCTTGGGAATGAGAATGTCGTACTGCCTTCTCCTAACCCTATAGCTTTCCTGAATGTAAGAGGTATCAGGACTTCAAGTTCAGAAGGAAGCTCAACAGAAAATGTTTCTATCAATAACATGACTGCTTCTGTTATGGAAGCAAGATCTATTCCTCTCTCCCCTCCAGCTGGAATGCGGATTTTCTACGCTTCAGGGGCGGCTGCTCACGATACTAGCCATCGGCTTGAACGGCTTGCTGGTTTCATGAATTTCGAAGCTGAATCTACGCACACTCAGAAATTACGTTTTCCTCCAGTTCTTTCTAGCTTCGCTAAGGGTCCAAGCATCAATGGAGGTGAGCACTTTTCACTGAGACCCACATCCTTTAACCCCATTTCCCTTCAACCATCGCAGCCAGGTCTGTATCTTGCTTCCTTGACATTTTCCGGGCGGCAAAAGCTATATATTGGTGCATTATATTTAATGGTAATGAAGAATTTTTCTGTACTGCCTATTTGCATTGCTTTACTCTTCTTTAGAACCTCCACTTCATTAGACAGTATCACTCCGAGTCAGCCTTTAAGAGATGGTCAGACCTTAGTTTCAAGTGTAGGAGCATTTGAGATGGGTTTTTTCAGTCCTGGAAAAACGAAGAACCGATACGTGGGTATATGGTACAAGCATATTTCTCCTTTGACAGTGGTATGGGTGGCCAATAGAGAAGCACCGCTCAGTGATGGTTCAGGAATTTTAGCAGTGAACGATCAGGGAATTCTTGTCCTGGTGGATAGCACAAATAGGACTGTTTGGTCATCTAATAATTCTATAATAGCTGAGAAGCCAATTGTAAGGCTCTTAGACACAGGAAATCTTATCATTAGTGACCAAAAATACTGTGATAAGGATCATTTCATATGGCAGAGTTTTGATTATCCCTGTGATACCTTATTGCCAGGAATGAAGCTTGGATTTAACCTGGTCACTGGTCTGAATAGGTTCCTATCTTCTTGGAAAAGCCCAGATGATCCTAGTCAAGGGGAACATATACTGAAATTATACCCTCAAGGATATCCACAATCATTTCAATTGAGGAGAAACGTCATACATTTCAGAGCAGGATCGTGGAATGGCCTTTATTTTACTGGATATCCAGTTCAAAAACAAAATCCAGTATACATGGCAAAGTTTGTTTTCAATGATAAAGAGGCATATTATGAGTATGAACTCGTGAATAGTTCAGTTTACTCCAGAATTACAATGTCTCCTTCAGGCATGGGGATGCGTTTAGTATGGAGTAATCAAAGAGGCATGTGGGAGATTATCTCAGCTAACATGGCAGATCAGTGTGACAATTATGGCTTGTGTGGGGCATACTCTATCTGCGATTTTAGTAGCTCCAGTGTCTGTGAGTGCTTGAAAGGATTTATGCCCAAAAATGTGGAACAGTGGAATATATCAAATTGGTCCGGTGGATGTGTTCAAAGTGCTCGAATGGATTGTAACAGTATAGATGGCTTCCGAAAGTATAGAGGTGTGAAATTGCCAGACACATCTTCTTCCCAGTTTAATAAGACCATGAACCTTGAGGAATGTCAACAATCATGCCAGAGAAATTGTTCTTGTACAGCATTTGCAAATTTGGATATCCGTGATGGAGGAAGTGGCTGCTTACTTTGGTTTAATGATCTGATTGACATGAAGCAATTACCTCAAGGAGGACAGGACATTTTTATTCGTGTCCCTCCTTCAGAGTTAGACTTTTTTGAGAATAAACGCTATGGAAACTTCAATAAGAGAAAGCTCCTAGGAATCGCTGTTGGTTCTGTTGCAGTAAACATGGGCATGATGCTTATAATTTTGGGATTGATTAAATGTGTATGGAAAAGAAAACTCAAAAAGTCAGGGATGACAAAAATATGTTATAAGAATCCTTGCTACAATAAATTAAGAATGGAAGACACGGATCTACAGATATTTGATTTGTCAATCATTGCTAAAGCCACTGATAATTTTTCAAGCGCCAATAAATTAGGAGAAGGTGGCTTCGGACCAGTCTACAAGGGCGCTTTGGGAGATGGACAAGAATTAGCAGTGAAAAGGCTATCTGAGAATTCTGTTCAAGGTTTTGAGGAGTTCAAAAATGAAGTTTTGTTGATAGCCAAACTTCAACATCGTAACCTTGTGAAACTTCTTGGTTGCTGCATTGAAGAAGAAGAAAAACTGTTGATCTATGAATACATGCCGAATAGAAGTCTAGACCACTTTATTTTTGATGAAAGTAGAAGCAAGGTGTTGGATTGGACAGAGCGTTTCCACATAATTAATGGCATTGCTCGTGGACTTCTCTATCTTCATGAAGATTCTAGATTAAGAGTCATTCATAGAGATTTAAAAACAAGCAATTTACTAGATACAAATTTAAATTCAAAAATATCAGATTTTGGCCTAGCTCGAACATTTGGAGATCAAATTGGGGCCAAAACAAGCAGGATAGCTGGAACATACGGTTACATGCCTCCAGAATATGCTATGCATGGACATTTCTCGATAAAATCAGATGTTTTCAGTTTTGGAGTAATAGTACTAGAGATGATCAGTGGAAAGAAGAATAGAGAATTTTCAGATTTAGAAAACTTCTTGAATCTTCTTGGATATGCATGGAGACTGTGGAGAGAGGGAATGGCCCTGGAATTAATGGATCAAGCATTAAGAGAAAGATTCAATCTATCGGAAGTCATGCAATGCATACAAGTGGGCCTGTTATGTGTGCAACAAAGACCAGAAGATAGACCAGACATGTCATCTGTGGTTTTAATGCTGAATGGAGAGAAATCATTGGCCGACCCAGGTGCTCCCGCTTTCTACATTGAAAGTAAAATGCCTGAAGCAGATTCTTCCCTGGAAAAATGTAAACCTTCCTCACCAAATGAAATGTCCCTTACAATATTCGAGGCAAGATAG 5301 0.4058 MKLNLNLNLFLSLMWLSLHSTDAITYRETLGMGQLLGTSDTLVSANGNFELGFFARENSTKYYVGMWFKKVPKDNIVWVANRKLATSDSNAVLTVNEEGNLVVKNEGMVYFVTNISGVSNTHALLLDSGNLLLMNNSKLNILWQSFDNPTNTLLPGMKVGFDSELEISWSLRSWTSVEDPSPGNFSLEVDTSNWRQRLIIRRKSEIYWVGDELSNFTFQSSNNRDGAIWDLGYLTWQGDYSSRLVLEVSGELNQQLWSQDTMQWVSLLSSKCGRNATCGNFGICNPQATDPCECLRGFKPYDEDSWKKGDTSAGCVRKNELCSNMSSNGLGDGFLPVDRVDFPLDSPLAFKTENALTCQKDCSINCSCVAYAYDVMGRCLFWLDRVLNLKNISVDLRDDNSRPSFHLKLARSELIDNELNTEKNPDHKSNQSQKVVLTIVVVISFLSLFTLVLFAYYCWTRKLGREAEDLLLFDTGMSMKVEISELSDVDKVGRVNKRDVKLPLFSFASVSAATNNFSPENKLGEGGFGPVYKGKLLNGGEVAVKRLSAKSGQGWEELKNEALLIAKLQHNNLVRLLGCCIERDEKMLIYEFMPNKSLDFFLFDATKRQILDWETRVRIIDGIAQGLLYLHQYSRFXIIHRDLKASNILLDINMNSKISDFGMARLFGRNELQANTNRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIISGKKNTGLYKTNSLNLLGYAWDLWTSGRGTELMDSALEGASIKKMVLLRYVNIALLCVQESAEDRPTMFDVVSMLGNENVVLPSPNPIAFLNVRGIRTSSSEGSSTENVSINNMTASVMEARSIPLSPPAGMRIFYASGAAAHDTSHRLERLAGFMNFEAESTHTQKLRFPPVLSSFAKGPSINGGEHFSLRPTSFNPISLQPSQPGLYLASLTFSGRQKLYIGALYLMVMKNFSVLPICIALLFFRTSTSLDSITPSQPLRDGQTLVSSVGAFEMGFFSPGKTKNRYVGIWYKHISPLTVVWVANREAPLSDGSGILAVNDQGILVLVDSTNRTVWSSNNSIIAEKPIVRLLDTGNLIISDQKYCDKDHFIWQSFDYPCDTLLPGMKLGFNLVTGLNRFLSSWKSPDDPSQGEHILKLYPQGYPQSFQLRRNVIHFRAGSWNGLYFTGYPVQKQNPVYMAKFVFNDKEAYYEYELVNSSVYSRITMSPSGMGMRLVWSNQRGMWEIISANMADQCDNYGLCGAYSICDFSSSSVCECLKGFMPKNVEQWNISNWSGGCVQSARMDCNSIDGFRKYRGVKLPDTSSSQFNKTMNLEECQQSCQRNCSCTAFANLDIRDGGSGCLLWFNDLIDMKQLPQGGQDIFIRVPPSELDFFENKRYGNFNKRKLLGIAVGSVAVNMGMMLIILGLIKCVWKRKLKKSGMTKICYKNPCYNKLRMEDTDLQIFDLSIIAKATDNFSSANKLGEGGFGPVYKGALGDGQELAVKRLSENSVQGFEEFKNEVLLIAKLQHRNLVKLLGCCIEEEEKLLIYEYMPNRSLDHFIFDESRSKVLDWTERFHIINGIARGLLYLHEDSRLRVIHRDLKTSNXLLDTNLNSKISDFGLARTFGXDQIGAKTSRIAGTYGYMPPEYAMHGHFSIKSDVFSFGVIVLEMISGKKNREFSDLENFLNLLGYAWRLWREGMALELMDQALRERFNLSEVMQCIQVGLLCVQQRPEDRPDMSSVVLMLNGEKSLADPGAPAFYIESKMPEADSSLEKCKPSSPNEMSLTIFEAR 1768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1113g0001 1768 Gene3D Phosphorylase Kinase; domain 1 1413 1526 - -
Prci1113g0001 1768 ProSiteProfiles PAN/Apple domain profile. 322 401 IPR003609 -
Prci1113g0001 1768 CDD PAN_AP_plant 1278 1361 - -
Prci1113g0001 1768 SUPERFAMILY Protein kinase-like (PK-like) 500 788 IPR011009 -
Prci1113g0001 1768 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1417 1526 - -
Prci1113g0001 1768 Pfam Protein tyrosine and serine/threonine kinase 520 787 IPR001245 GO:0004672|GO:0006468
Prci1113g0001 1768 Pfam Protein tyrosine and serine/threonine kinase 1454 1720 IPR001245 GO:0004672|GO:0006468
Prci1113g0001 1768 ProSiteProfiles PAN/Apple domain profile. 1280 1361 IPR003609 -
Prci1113g0001 1768 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1527 1730 - -
Prci1113g0001 1768 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 179 IPR036426 -
Prci1113g0001 1768 Gene3D Phosphorylase Kinase; domain 1 492 592 - -
Prci1113g0001 1768 Gene3D - 961 1089 IPR036426 -
Prci1113g0001 1768 Gene3D - 22 146 IPR036426 -
Prci1113g0001 1768 Pfam D-mannose binding lectin 1013 1118 IPR001480 -
Prci1113g0001 1768 Pfam D-mannose binding lectin 76 174 IPR001480 -
Prci1113g0001 1768 CDD STKc_IRAK 1457 1724 - -
Prci1113g0001 1768 SMART ntp_6 329 400 IPR003609 -
Prci1113g0001 1768 SMART ntp_6 1281 1360 IPR003609 -
Prci1113g0001 1768 ProSiteProfiles Bulb-type lectin domain profile. 965 1086 IPR001480 -
Prci1113g0001 1768 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 960 1089 - -
Prci1113g0001 1768 Gene3D Hepatocyte Growth Factor 1277 1358 - -
Prci1113g0001 1768 SMART blect_4 33 149 IPR001480 -
Prci1113g0001 1768 SMART blect_4 971 1092 IPR001480 -
Prci1113g0001 1768 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Prci1113g0001 1768 ProSiteProfiles Protein kinase domain profile. 1451 1728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1113g0001 1768 CDD PAN_AP_plant 326 410 - -
Prci1113g0001 1768 ProSiteProfiles Protein kinase domain profile. 517 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1113g0001 1768 SMART serkin_6 517 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1113g0001 1768 SMART serkin_6 1451 1698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci1113g0001 1768 SUPERFAMILY Protein kinase-like (PK-like) 1436 1743 IPR011009 -
Prci1113g0001 1768 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 951 1709 - -
Prci1113g0001 1768 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Prci1113g0001 1768 Pfam S-locus glycoprotein domain 1150 1259 IPR000858 GO:0048544
Prci1113g0001 1768 Pfam S-locus glycoprotein domain 217 300 IPR000858 GO:0048544
Prci1113g0001 1768 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1279 1360 - -
Prci1113g0001 1768 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 593 796 - -
Prci1113g0001 1768 CDD STKc_IRAK 523 788 - -
Prci1113g0001 1768 SUPERFAMILY alpha-D-mannose-specific plant lectins 1014 1123 IPR036426 -
Prci1113g0001 1768 FunFam Uncharacterized protein 492 592 - -
Prci1113g0001 1768 Gene3D Transferase(Phosphotransferase) domain 1 1527 1730 - -
Prci1113g0001 1768 Gene3D Transferase(Phosphotransferase) domain 1 593 794 - -
Prci1113g0001 1768 Pfam PAN-like domain 331 388 IPR003609 -
Prci1113g0001 1768 Pfam PAN-like domain 1280 1346 IPR003609 -
Prci1113g0001 1768 CDD B_lectin 971 1092 IPR001480 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1113g0001 505 824 Receptor kinase-like Gene Family AT4G11530 56.966 5.88e-109 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci1113g0001 PK_Tyr_Ser-Thr 1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1113g0001 - - pcin:129299332 3528.03