Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1111g0004 ATGAAAAGGGCTGATTCAGGTCCAAATCATTCGAGCCAGCTGACGACGTCTCTATTCAACGAAACCGGAAAACGGCCGAGGGACGTCGGCGTGCAGGGTAATTCCCAGGATTCGGAAGACCTCGAACACGGTGTTTTGGCAAGAGCTTATTCTTCGACCAAAGATAAAAAGATACATAAGCGGATGGACAGAGCCAAGTATGTGGCATTGGTGGGAGCTGGAGCTCTCTTGGGCTCTGTGTCTACCGTCTTCGTTCTAAAGCTTCTACAAAAACGCAGTGTACAGCAATGCGGAAAGAATACTACTGAATTAAACGGTATGGAGAAATGTACTGCCACTCATAAGAAGAATGATAAGGTGGCTAAGGAAGATCTTCTAAATGATGAGATTGTTTCTGAACACCTGACTAGGAACATTCAGTTCTTTGGTTTTGAATCTCAAAGGAAAGTGACTGCATCATATGTTGTGGTCATTGGCCTTGGAGGGGTTGGTAGTCATGCTGCATCTATGCTTTTGAGGTCAGGGGTTGGCAAGCTACTTCTAGTGGACTTTGACCAGGTTTCTCTTTCTTCACTAAATCGACACGCTGTTGCAACAAGAGCAGATGTTGGCATCCCAAAAGCTCAGTGCCTCAAGGAGCATTTCTTATCTATTTTCCCGGAGTGCCAAATAGATGCAAAAGTTCTGTTATATGATACATCTACTGAAGAAGAAATTCTCTCAGGCCATCCTGATTTTGTTCTGGACTGTATTGACAACATTGATACAAAGGTGGCCCTTCTTGCTGCATGTGTACGTAGGGGATTGAAGGTTCTATCTGCTATGGGAGCTGGTGCTCGGGCCGATCCAACAAGAATACGCATTGCTGATCTAAGAGAATCCACTAATGATCCATTATCTCGAGCTGTAAGACACCGCTTGAGGAAAGATCATGGCATTGAAGGTGGTATTCCTGTTGCCTTTTCTTTAGAGAAACCCAAAGTAAAGTTGCTTCCATTCAAAGGACCAAGTGGAGAAGAGGAAAACCCTTCAGACTATCAGATTGTACCAGGCTTTAGGGTCCGTATCATACCTGTGCTGGGCTCCATCCCGGCAATATTTGGACAAGTCATGGCCTCCTATGTTGTGACATGTCTAGCAGGGTTGCAAGTTCAAACAGAACCTGTAGTCAATTTTGACACGGATCATTACCATACTCTTCATCAGCGCCTAATTGAGCATGAGGAGTCATTGTATGGCTCAGCTGTGCATGTGCAGGTTGATGTGGAAGAAGTGATGTATATTGCCAAAGAATTGTGGCACGGCAGAAGTGCTAGAGAGCAGTTTGCGAAAGATGTTGGACGAGGGATGTGGCGATCAGTTAATGAATTGATGCTTGTAAGGTGGGATCGCACTAAACCAGCCAATGTTTCAAATCTAATTCTTTTAAAATTCAAAGAGGCGGATGAGCATGAGTCACGGACAGTAGATGATATAAAGAAGGAAGAACCAGAATTCTACAAGAGGGTAACTGGCGTTTTAAGACGAGCTGAATTTGACTTTGGGTTGTGA 1551 0.4442 MKRADSGPNHSSQLTTSLFNETGKRPRDVGVQGNSQDSEDLEHGVLARAYSSTKDKKIHKRMDRAKYVALVGAGALLGSVSTVFVLKLLQKRSVQQCGKNTTELNGMEKCTATHKKNDKVAKEDLLNDEIVSEHLTRNIQFFGFESQRKVTASYVVVIGLGGVGSHAASMLLRSGVGKLLLVDFDQVSLSSLNRHAVATRADVGIPKAQCLKEHFLSIFPECQIDAKVLLYDTSTEEEILSGHPDFVLDCIDNIDTKVALLAACVRRGLKVLSAMGAGARADPTRIRIADLRESTNDPLSRAVRHRLRKDHGIEGGIPVAFSLEKPKVKLLPFKGPSGEEENPSDYQIVPGFRVRIIPVLGSIPAIFGQVMASYVVTCLAGLQVQTEPVVNFDTDHYHTLHQRLIEHEESLYGSAVHVQVDVEEVMYIAKELWHGRSAREQFAKDVGRGMWRSVNELMLVRWDRTKPANVSNLILLKFKEADEHESRTVDDIKKEEPEFYKRVTGVLRRAEFDFGL 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1111g0004 516 MobiDBLite consensus disorder prediction 1 42 - -
Prci1111g0004 516 CDD YgdL_like 142 376 - -
Prci1111g0004 516 MobiDBLite consensus disorder prediction 7 22 - -
Prci1111g0004 516 FunFam tRNA threonylcarbamoyladenosine dehydratase 2-like 127 386 - -
Prci1111g0004 516 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 133 418 IPR035985 GO:0008641
Prci1111g0004 516 PANTHER TRNA THREONYLCARBAMOYLADENOSINE DEHYDRATASE 75 513 IPR045886 -
Prci1111g0004 516 Pfam ThiF family 136 398 IPR000594 -
Prci1111g0004 516 Gene3D - 126 392 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1111g0004 176 278 Sulfurtransferasese or Rhodanese AT5G55130 30.097 9.20e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1111g0004 K22132 - gmx:100815445 783.482