Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1102g0002 ATGGAAGTTCATCAACACCAACCCGAGCCTCTCCTTCAACCAGCCTCTCCTCCTTCTTCCTCCTCCTCCGCCGCCACAGAACCCGCCATTCATGTACACCACAGAGAAGAAGAGAAGATTCCAAAGTCATCCAAGAAGAAGAAGACGACGACGACCGGTGACAACAACACAGAGATGGTGGATGGGAAGCATCCTACATACAGAGGTGTACGAATGCGTCAATGGGGAAAATGGGTTTCAGAAATCAGAGAGCCAAGGAAGAAATCCAGAATCTGGCTCGGCACTTTCCCTACTGCAGAGATGGCGGCTCGAGCTCACGACGTCGCAGCTCTCTCCGTCAAAAGCAACTCCGCTTTCCTCAATTTCCCGGAGCTTGCCGCCGTTTATCCTCGTCCGGCCAGTAACTCCCCAAAGGACGTCCAAGCCGCCGCCGCCAAGGCAGCCGCTATCGATTATCAAGTTAATCGTCAGGAAGCCGAAGCCGAAGCCGAGTCCCGGGTGACGCAAGCCGACGCTCAAGCGCTGTCAAATTCACCGTTGACGGACGACGACGACGACACGTTCTTCGACCTCCCTGATATCTTAAATGACGGCGTTGACGAGTTTCATTACTCTTCGCTGTGGCTCCTAGCCGGGAACGATTACAGAGACTCAGGTTTCCGGCTCGAAGAGCCATTTCTATGGGACTCTTATTAG 696 0.5374 MEVHQHQPEPLLQPASPPSSSSSAATEPAIHVHHREEEKIPKSSKKKKTTTTGDNNTEMVDGKHPTYRGVRMRQWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALSVKSNSAFLNFPELAAVYPRPASNSPKDVQAAAAKAAAIDYQVNRQEAEAEAESRVTQADAQALSNSPLTDDDDDTFFDLPDILNDGVDEFHYSSLWLLAGNDYRDSGFRLEEPFLWDSY 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1102g0002 231 Gene3D AP2/ERF domain 66 124 IPR036955 GO:0003700|GO:0006355
Prci1102g0002 231 Pfam AP2 domain 65 113 IPR001471 GO:0003700|GO:0006355
Prci1102g0002 231 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Prci1102g0002 231 PRINTS Ethylene responsive element binding protein signature 89 105 IPR001471 GO:0003700|GO:0006355
Prci1102g0002 231 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 43 196 - -
Prci1102g0002 231 MobiDBLite consensus disorder prediction 29 52 - -
Prci1102g0002 231 SMART rav1_2 66 129 IPR001471 GO:0003700|GO:0006355
Prci1102g0002 231 ProSiteProfiles AP2/ERF domain profile. 66 123 IPR001471 GO:0003700|GO:0006355
Prci1102g0002 231 MobiDBLite consensus disorder prediction 160 183 - -
Prci1102g0002 231 MobiDBLite consensus disorder prediction 1 65 - -
Prci1102g0002 231 SUPERFAMILY DNA-binding domain 66 124 IPR016177 GO:0003677
Prci1102g0002 231 Coils Coil 142 162 - -
Prci1102g0002 231 CDD AP2 67 125 IPR001471 GO:0003700|GO:0006355
Prci1102g0002 231 FunFam Ethylene-responsive transcription factor 2 65 124 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1102g0002 46 227 AP2-EREBP Transcription Factor Family AT2G44940 51.376 8.42e-59 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci1102g0002 AP2 4.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1102g0002 - - pcin:129299286 414.075