Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1101g0001 ATGGCCGTGCCATTGCTTTCAAAGAAGATCGTGAAGAAGCGGGTCAAGAAGTTCAAGAGGCCGCAGAGCGACCGCAAGATCTCTGTGAAGGAAAACTGGCGCAGGCCAAAGGGTATTGATTCCCGTGTCAGGAGGAAGTTCAAGGGATGCACTTTAATGCCAAATATTGGCTATGGATCAGACAAGAAGACTAGACACTATCTCCCAAATGGTTTCAAGAAATTTGTTGTGAACAATGTCAAAGAGCTAGAACTTCTCATGATGCATAATAGGACATACTGTGCTGAGATTGCTCACAATGTTTCCACAAGGAAGAGAAAGGAGATAGTTGAGAGAGCTGGCCCAGCTTGA 351 0.453 MAVPLLSKKIVKKRVKKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVNNVKELELLMMHNRTYCAEIAHNVSTRKRKEIVERAGPA 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1101g0001 116 CDD Ribosomal_L32_L32e 22 113 IPR001515 GO:0003735|GO:0005840|GO:0006412
Prci1101g0001 116 SMART Ribosomal_L32e_2 15 115 IPR001515 GO:0003735|GO:0005840|GO:0006412
Prci1101g0001 116 SUPERFAMILY Ribosomal protein L32e 2 113 IPR036351 -
Prci1101g0001 116 Pfam Ribosomal protein L32 16 114 IPR001515 GO:0003735|GO:0005840|GO:0006412
Prci1101g0001 116 PANTHER 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 1 113 IPR001515 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1101g0001 1 114 Cytoplasmic Ribosomal Protein Gene Family AT4G18100 85.965 5.89e-72 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1101g0001 K02912 - qsa:O6P43_032077 216.468