Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g3067 ATGCCGTCTGAGTTCAAGTTAACAGGTAATCCAACCTCTCATCTTCTGGGAAAAAGTCCAAATGTTAAAATGGGAAGCACTGACGTAATAGCATCGCATAGTCCTGAAAATGGTGCTATAGATAGGAAGGTTTCTGAGGAACTTCAGGATTGTGCCGGTGACATGGATTTCATCAACGAGGACTCGCCATATGGTGAAAAGAATACATCACTAGAAAGTAGGCACTCTAGTGGTGATGAAGAAGTCGATCCTATACCTCTGCCCCTTTCTTCAATCTCAAAATCTTTCTGGGAACGCAGGTGGAGTGATACAACACCTTATGCTTCAAAAATGAAGCTTCAGTCATGGTATCAACTTCCAAATGGAAATTGGGAGTTGGGGAAGATAATATCAACTTCCGGAGCTGAATCTGTTATTTCACTGCCTAATGGGAAGGTTTTAAAGGTGAAAGGTGAAAGTTTGGTCCCAGCAAATCCTGATATTCTTGATGGAGTGGATGATCTGATGCAGCTTAGTTATTTAAATGAACCTTCGGTTTTATACAATTTGCAACATAGATACAATCAAAATAGTATTTATACGAAAGCTGGGCCAATTTTGGTTGCTGTAAATCCCTTTAAGAAAGTTCTTTTGTATGGAAATGATTATATTGAAGCATACAAGCGTAAAACAAGTGAAAGCCCTCATGTATATGCCATTACAGACACAGCTATTCAGGAAATGATACGAGATGAAGTAAATCAATCCATTATTATAAGTGGTGAAAGTGGAGCTGGAAAAACTGAGACAGCAAAGATAGCAATGCAGTACTTGGCTGCTCTGGGTGGTGGAAGTGGAATAGAGTATGAGATATTGAAGACTAATCCAATACTAGAAGCCTTTGGTAATGCAAAGACATTGAGAAATGACAACTCAAGTCGTTTTGGAAAGCTCATTGAGATACACTTTAGTGAGACTGGACAGATATCGGGTGCTATCATTCAAACATTTTTGTTGGAAAAGTCTAGAGTAGTCCAATGCAATGAAGGAGAAAGGTCATATCATATATTTTATCAGCTATGTGCTGGAGCACCACCTTCTCTAAGGGAGAAGTTGAATCTACAGAGTGCAGAAGACTATAAATATCTCAGGCAGAGCAATTGCTATATGATATTTGGTGTTAATGATGCAGAGGAATTTAGCATAGTCATGGAAGCTTTGGATGTTGTCCACATCAGCAAAGAAGACCAGGAGGATGTATTTGCAATGCTTGCTGCAGTGCTATGGCTGGGAAACATATCTTTTACTGTAATTGATAATGAAAACCATGTTCAACCTGTAGAAGATGAGGCTCTGTTCAACGTTGCCAAATTGATAGGCTGTGACATTGGAAATCTTAAGTTGACTTTATCAACTCGCAACATGAAAGTTGGTAATGATAACATTGTTCAAAAGTTGAAGCTATCACAGGCCATTGATGCTAGAGATGCTTTGGCAAAGTCAATATATGCTTGCCTGTTTGATTGGTTGGTGGAGCAAATAAACAAATCACTTGCTGTTGGCAAAAGGCGTACAGGCAGATCTATCAGTATTCTAGATATATATGGGTTTGAATCATTTGATAGGAATAGTTTTGAGCAGTTCTGTATCAATTATGCAAACGAGAGATTGCAGCAACATTTCAATCGTCATTTATTCAAGTTAGAACAGGAGGAATACATACAAGATGGCATTGATTGGGCAAAAGTTGAATTTGAAGATAACCAAGACTGCCTCAATCTTTTTGAAAAGAAACCACTGGGATTACTATCTCTGTTAGATGAAGAGTCCACTTTCCCTAATGGCACAGATCTGACATTTGCTAACAAGCTTAAGCAGCATTTGAATTCTAATTCATGTTTCAGAGGAGAGCGAGGCAAGGCTTTTACTGTGTGCCACTATGCTGGGGAGGTCATGTACGACACAACTGGATTTCTGGAAAAAAACAGGGACCTATTGCACTTGGATTCCATTCAACTTCTATCGTCATGCAGGTGTCATCTTCCTCAGATATTTGCATCCTTTATGCTTACCCAGTCTGAGAAGCCTGTTGTTGGTCCCTTACACAAGTTAGGTGGAGCTGATTCTCAAAAGCTAAGTGTTGCAACAAAGTTCAAGGGTCAACTGTTCCAATTGATGCAAAGGTTGGAGGGCACTACCCCACATTTTATTCGCTGTATTAAGCCCAATAACCTCCAGTCTCCAGGATTATATGAACAAGGTCTTGTGCTACAGCAGCTAAAATGTTGTGGAGTGCTAGAAGTGGTTCGAATATCAAGATCAGGCTTCCCTACTAGAATGTCTCACCAAAAGTTTGCCAGAAGATACGGTTTTCTTCTCCTTGAGAATGTTGCATCTCAGGATCCACTTGGTGTTTCAGTTGCAATTCTTCATCAGTTTAATATTTTGCCTGATATGTATCAAGTTGGCTACACAAAATTATTTTTCCGAACAGGCCAGATTGGAATACTTGAAGATACCAGAAATCGTACCCTTCATGGCATTTTACGTGTCCAAAGTTTCTTCAGGGGTCACCAAACTCGGTGTTACCTGAAGGAACTTCGCAGAGGAATCATTACTCTTCAGTCTTTTATTAGGGGGGAGAACATCAGAAACGAATTTGCAGCTTCACTTCGGAGACATAGAGCTGCTGTCCTTATACAAAAGCGGATGAAAGCAATATTTGTAAGAAACAGAACGAAGAATACTAATGAAGCTGCAATTGTTATACAATCGATCATTCGTGGCTGGTTAGTCAGAAGATGCTCAGGAGATTTAGGATCATTGAAATCTGAAGGCGTGAAGACAAATGAATCGGATGAGGTACTGGTCAAGTCTTCTTTCTTAGCTGAATTACAGCGTCGGGTGCTCAAGGCAGAAGCTGCACTGAGGGACAAAGAAGAGGAGAATGACATCCTCCACCAACGTCTCCAACAGTATGAAAGCCGTTGGTCTGAGTATGAATTGAAGATGAAGTCCATGGAAGAAGTGTGGCAAAAACAAATGAGATCCCTACAGTCCAGCCTCTCCATTGCAAAGAAGAGCCTTGCAATTGATGATTCAGAAAGGAACTCAGATGCATCCGTCAATGCAAGTGATGAAAGAGATTACAGCTGGGATATAGGAAATAACCATGGACGCCAAGAAAGCAATGGAACAAGGTCAATGAGCGCAGGCTTGAGTGTTATAAGTCGGTTGGCTGAAGAATTTGAGCAGCGGAGTCAAGTATTTGGTGATGATGCCAAGTTCTTGGTGGAGGTAAAATCTGGTCAAGTTGAAGCAAGTTTAAATCCAGACCAGGAGCTCAGAAGGTTGAAGCAGATGTTTGAAGCTTGGAAAAAGGATTATGGTGCAAGACTACGTGAAACCAAGGTCATTTTACATAAGCTTGGAACTGAAGAAGGTGCACTTGACAAAGTGAAGAGGAAATGGTGGGGAAGAAGGAACAGTTCAAGGATAAATTGA 3483 0.4045 MPSEFKLTGNPTSHLLGKSPNVKMGSTDVIASHSPENGAIDRKVSEELQDCAGDMDFINEDSPYGEKNTSLESRHSSGDEEVDPIPLPLSSISKSFWERRWSDTTPYASKMKLQSWYQLPNGNWELGKIISTSGAESVISLPNGKVLKVKGESLVPANPDILDGVDDLMQLSYLNEPSVLYNLQHRYNQNSIYTKAGPILVAVNPFKKVLLYGNDYIEAYKRKTSESPHVYAITDTAIQEMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGQISGAIIQTFLLEKSRVVQCNEGERSYHIFYQLCAGAPPSLREKLNLQSAEDYKYLRQSNCYMIFGVNDAEEFSIVMEALDVVHISKEDQEDVFAMLAAVLWLGNISFTVIDNENHVQPVEDEALFNVAKLIGCDIGNLKLTLSTRNMKVGNDNIVQKLKLSQAIDARDALAKSIYACLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFEDNQDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNSCFRGERGKAFTVCHYAGEVMYDTTGFLEKNRDLLHLDSIQLLSSCRCHLPQIFASFMLTQSEKPVVGPLHKLGGADSQKLSVATKFKGQLFQLMQRLEGTTPHFIRCIKPNNLQSPGLYEQGLVLQQLKCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLENVASQDPLGVSVAILHQFNILPDMYQVGYTKLFFRTGQIGILEDTRNRTLHGILRVQSFFRGHQTRCYLKELRRGIITLQSFIRGENIRNEFAASLRRHRAAVLIQKRMKAIFVRNRTKNTNEAAIVIQSIIRGWLVRRCSGDLGSLKSEGVKTNESDEVLVKSSFLAELQRRVLKAEAALRDKEEENDILHQRLQQYESRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAIDDSERNSDASVNASDERDYSWDIGNNHGRQESNGTRSMSAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVEASLNPDQELRRLKQMFEAWKKDYGARLRETKVILHKLGTEEGALDKVKRKWWGRRNSSRIN 1160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g3067 1160 Pfam IQ calmodulin-binding motif 841 858 IPR000048 GO:0005515
Prci10g3067 1160 Pfam IQ calmodulin-binding motif 911 927 IPR000048 GO:0005515
Prci10g3067 1160 Gene3D - 839 887 - -
Prci10g3067 1160 Gene3D - 888 930 - -
Prci10g3067 1160 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 110 159 IPR004009 GO:0003774|GO:0005524|GO:0016459
Prci10g3067 1160 FunFam Myosin heavy chain 345 401 - -
Prci10g3067 1160 Gene3D - 533 725 - -
Prci10g3067 1160 Gene3D Myosin VI head, motor domain, U50 subdomain 402 510 - -
Prci10g3067 1160 MobiDBLite consensus disorder prediction 1 33 - -
Prci10g3067 1160 ProSiteProfiles IQ motif profile. 839 866 IPR000048 GO:0005515
Prci10g3067 1160 ProSiteProfiles IQ motif profile. 860 889 IPR000048 GO:0005515
Prci10g3067 1160 Gene3D - 769 833 - -
Prci10g3067 1160 Coils Coil 955 1003 - -
Prci10g3067 1160 MobiDBLite consensus disorder prediction 55 85 - -
Prci10g3067 1160 PRINTS Myosin heavy chain signature 521 549 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci10g3067 1160 PRINTS Myosin heavy chain signature 289 316 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci10g3067 1160 PRINTS Myosin heavy chain signature 574 602 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci10g3067 1160 PRINTS Myosin heavy chain signature 193 212 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci10g3067 1160 PRINTS Myosin heavy chain signature 247 272 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci10g3067 1160 FunFam Unconventional myosin-XIX 533 725 - -
Prci10g3067 1160 Gene3D Kinesin motor domain 162 768 IPR036961 -
Prci10g3067 1160 Pfam Myosin head (motor domain) 165 823 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci10g3067 1160 SMART MYSc_2a 157 836 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci10g3067 1160 MobiDBLite consensus disorder prediction 1 41 - -
Prci10g3067 1160 ProSiteProfiles Myosin motor domain profile. 163 835 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci10g3067 1160 MobiDBLite consensus disorder prediction 1028 1061 - -
Prci10g3067 1160 Gene3D - 345 401 - -
Prci10g3067 1160 ProSiteProfiles IQ motif profile. 909 938 IPR000048 GO:0005515
Prci10g3067 1160 SMART iq_5 859 881 IPR000048 GO:0005515
Prci10g3067 1160 SMART iq_5 885 907 IPR000048 GO:0005515
Prci10g3067 1160 SMART iq_5 836 858 IPR000048 GO:0005515
Prci10g3067 1160 SMART iq_5 908 930 IPR000048 GO:0005515
Prci10g3067 1160 CDD MYSc_Myo8 177 823 IPR036022 -
Prci10g3067 1160 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 880 IPR027417 -
Prci10g3067 1160 PANTHER MYOSIN 156 1156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g3067 Prci-Chr10 39126133 39154030 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g3067 1 1158 Myosins gene family AT1G50360 76.121 0.0 1808
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g3067 - - gmx:100781736 1960.65