Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g3066 ATGGATTTCATCAACGAGGACTCGCCATATGGTGAAAAGAATACATCACTAGAAAGTAGGCACTCTAGTGGTGATGAAGAAGTCGATCCTATACCTCTGCCCCTTTCTTCAATCTCAAAATCTTTCTGGGAACGCAGGTGGAGTGATACAACACCTTATGCTTCAAAAATGAATGCTAAAAGTGAAAATGAGCTGATGGGAAACTATGTAGTGTTAAGTTCCTTGCCTTCAACAGTAGGAACAGGATTTAGTAAAACCAACAAGCTTCAGTCATGGTATCAACTTCCAAATGGAAATTGGGAGTTGGGGAAGATAATATCAACTTCCGGAGCTGAATCTGTTATTTCACTGCCTAATGGGAAGGTTTTAAAGGTGAAAGGTGAAAGTTTGGTCCCAGCAAATCCTGATATTCTTGATGGAGTGGATGATCTGATGCAGCTTAGTTATTTAAATGAACCTTCGGTTTTATACAATTTGCAACATAGATACAATCAAAATAGTATTTATACGAAAGCTGGGCCAATTTTGGTTGCTGTAAATCCCTTTAAGAAAGTTCTTTTGTATGGAAATGATTATATTGAAGCATACAAGCGTAAAACAAGTGAAAGCCCTCATGTATATGCCATTACAGACACAGCTATTCAGGAAATGATACGAGATGAAGTAAATCAATCCATTATTATAAGTGGTGAAAGTGGAGCTGGAAAAACTGAGACAGCAAAGATAGCAATGCAGTACTTGGCTGCTCTGGGTGGTGGAAGTGGAATAGAGTATGAGATATTGAAGACTAATCCAATACTAGAAGCCTTTGGTAATGCAAAGACATTGAGAAATGACAACTCAAGTCGTTTTGGAAAGCTCATTGAGATACACTTTAGTGAGACTGGACAGATATCGGGTGCTATCATTCAAACATTTTTGTTGGAAAAGTCTAGAGTAGTCCAATGCAATGAAGGAGAAAGGTCATATCATATATTTTATCAGCTATGTGCTGGAGCACCACCTTCTCTAAGGGAGAAGTTGAATCTACAGAGTGCAGAAGACTATAAATATCTCAGGCAGAGCAATTGCTATATGATATTTGGTGTTAATGATGCAGAGGAATTTAGCATAGTCATGGAAGCTTTGGATGTTGTCCACATCAGCAAAGAAGACCAGGAGGATGTATTTGCAATGCTTGCTGCAGTGCTATGGCTGGGAAACATATCTTTTACTGTAATTGATAATGAAAACCATGTTCAACCTGTAGAAGATGAGGCTCTGTTCAACGTTGCCAAATTGATAGGCTGTGACATTGGAAATCTTAAGTTGACTTTATCAACTCGCAACATGAAAGTTGGTAATGATAACATTGTTCAAAAGTTGAAGCTATCACAGGCCATTGATGCTAGAGATGCTTTGGCAAAGTCAATATATGCTTGCCTGTTTGATTGGTTGGTGGAGCAAATAAACAAATCACTTGCTGTTGGCAAAAGGCGTACAGGCAGATCTATCAGTATTCTAGATATATATGGGTTTGAATCATTTGATAGGAATAGTTTTGAGCAGTTCTGTATCAATTATGCAAACGAGAGATTGCAGCAACATTTCAATCGTCATTTATTCAAGTTAGAACAGGAGGAATACATACAAGATGGCATTGATTGGGCAAAAGTTGAATTTGAAGATAACCAAGACTGCCTCAATCTTTTTGAAAAGAAACCACTGGGATTACTATCTCTGTTAGATGAAGAGTCCACTTTCCCTAATGGCACAGATCTGACATTTGCTAACAAGCTTAAGCAGCATTTGAATTCTAATTCATGTTTCAGAGGAGAGCGAGGCAAGGCTTTTACTGTGTGCCACTATGCTGGGGAGGTCATGTACGACACAACTGGATTTCTGGAAAAAAACAGGGACCTATTGCACTTGGATTCCATTCAACTTCTATCGTCATGCAGGTGTCATCTTCCTCAGATATTTGCATCCTTTATGCTTACCCAGTCTGAGAAGCCTGTTGTTGGTCCCTTACACAAGTTAGGTGGAGCTGATTCTCAAAAGCTAAGTGTTGCAACAAAGTTCAAGGGTCAACTGTTCCAATTGATGCAAAGGTTGGAGGGCACTACCCCACATTTTATTCGCTGTATTAAGCCCAATAACCTCCAGTCTCCAGGATTATATGAACAAGGTCTTGTGCTACAGCAGCTAAAATGTTGTGGAGTGCTAGAAGTGGTTCGAATATCAAGATCAGGCTTCCCTACTAGAATGTCTCACCAAAAGTTTGCCAGAAGATACGGTTTTCTTCTCCTTGAGAATGTTGCATCTCAGGATCCACTTGGTGTTTCAGTTGCAATTCTTCATCAGTTTAATATTTTGCCTGATATGTATCAAGTTGGCTACACAAAATTATTTTTCCGAACAGGCCAGATTGGAATACTTGAAGATACCAGAAATCGTACCCTTCATGGCATTTTACGTGTCCAAAGTTTCTTCAGGGGTCACCAAACTCGGTGTTACCTGAAGGAACTTCGCAGAGGAATCATTACTCTTCAGTCTTTTATTAGGGGGGAGAACATCAGAAACGAATTTGCAGCTTCACTTCGGAGACATAGAGCTGCTGTCCTTATACAAAAGCGGATGAAAGCAATATTTGTAAGAAACAGAACGAAGAATACTAATGAAGCTGCAATTGTTATACAATCGATCATTCGTGGCTGGTTAGTCAGAAGATGCTCAGGAGATTTAGGATCATTGAAATCTGAAGGCGTGAAGACAAATGAATCGGATGAGGTACTGGTCAAGTCTTCTTTCTTAGCTGAATTACAGCGTCGGGTGCTCAAGGCAGAAGCTGCACTGAGGGACAAAGAAGAGGAGAATGACATCCTCCACCAACGTCTCCAACAGTATGAAAGCCGTTGGTCTGAGTATGAATTGAAGATGAAGTCCATGGAAGAAGTGTGGCAAAAACAAATGAGATCCCTACAGTCCAGCCTCTCCATTGCAAAGAAGAGCCTTGCAATTGATGATTCAGAAAGGAACTCAGATGCATCCGTCAATGCAAGTGATGAAAGAGATTACAGCTGGGATATAGGAAATAACCATGGACGCCAAGAAAGCAATGGAACAAGGTCAATGAGCGCAGGCTTGAGTGTTATAAGTCGGTTGGCTGAAGAATTTGAGCAGCGGAGTCAAGTATTTGGTGATGATGCCAAGTTCTTGGTGGAGGTAAAATCTGGTCAAGTTGAAGCAAGTTTAAATCCAGACCAGGAGCTCAGAAGGTTGAAGCAGATGTTTGAAGCTTGGAAAAAGGATTATGGTGCAAGACTACGTGAAACCAAGGTCATTTTACATAAGCTTGGAACTGAAGAAGGTGCACTTGACAAAGTGAAGAGGAAATGGTGGGGAAGAAGGAACAGTTCAAGGATAAATTGA 3411 0.4022 MDFINEDSPYGEKNTSLESRHSSGDEEVDPIPLPLSSISKSFWERRWSDTTPYASKMNAKSENELMGNYVVLSSLPSTVGTGFSKTNKLQSWYQLPNGNWELGKIISTSGAESVISLPNGKVLKVKGESLVPANPDILDGVDDLMQLSYLNEPSVLYNLQHRYNQNSIYTKAGPILVAVNPFKKVLLYGNDYIEAYKRKTSESPHVYAITDTAIQEMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGQISGAIIQTFLLEKSRVVQCNEGERSYHIFYQLCAGAPPSLREKLNLQSAEDYKYLRQSNCYMIFGVNDAEEFSIVMEALDVVHISKEDQEDVFAMLAAVLWLGNISFTVIDNENHVQPVEDEALFNVAKLIGCDIGNLKLTLSTRNMKVGNDNIVQKLKLSQAIDARDALAKSIYACLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFEDNQDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNSCFRGERGKAFTVCHYAGEVMYDTTGFLEKNRDLLHLDSIQLLSSCRCHLPQIFASFMLTQSEKPVVGPLHKLGGADSQKLSVATKFKGQLFQLMQRLEGTTPHFIRCIKPNNLQSPGLYEQGLVLQQLKCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLENVASQDPLGVSVAILHQFNILPDMYQVGYTKLFFRTGQIGILEDTRNRTLHGILRVQSFFRGHQTRCYLKELRRGIITLQSFIRGENIRNEFAASLRRHRAAVLIQKRMKAIFVRNRTKNTNEAAIVIQSIIRGWLVRRCSGDLGSLKSEGVKTNESDEVLVKSSFLAELQRRVLKAEAALRDKEEENDILHQRLQQYESRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAIDDSERNSDASVNASDERDYSWDIGNNHGRQESNGTRSMSAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVEASLNPDQELRRLKQMFEAWKKDYGARLRETKVILHKLGTEEGALDKVKRKWWGRRNSSRIN 1136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g3066 1136 Coils Coil 931 979 - -
Prci10g3066 1136 ProSiteProfiles IQ motif profile. 815 842 IPR000048 GO:0005515
Prci10g3066 1136 Gene3D Myosin VI head, motor domain, U50 subdomain 378 486 - -
Prci10g3066 1136 ProSiteProfiles Myosin motor domain profile. 139 811 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci10g3066 1136 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 856 IPR027417 -
Prci10g3066 1136 Pfam IQ calmodulin-binding motif 817 834 IPR000048 GO:0005515
Prci10g3066 1136 Pfam IQ calmodulin-binding motif 887 903 IPR000048 GO:0005515
Prci10g3066 1136 ProSiteProfiles IQ motif profile. 885 914 IPR000048 GO:0005515
Prci10g3066 1136 SMART MYSc_2a 133 812 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci10g3066 1136 FunFam Myosin heavy chain 321 377 - -
Prci10g3066 1136 Gene3D Kinesin motor domain 138 744 IPR036961 -
Prci10g3066 1136 ProSiteProfiles IQ motif profile. 836 865 IPR000048 GO:0005515
Prci10g3066 1136 MobiDBLite consensus disorder prediction 1004 1037 - -
Prci10g3066 1136 Gene3D - 745 809 - -
Prci10g3066 1136 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 86 135 IPR004009 GO:0003774|GO:0005524|GO:0016459
Prci10g3066 1136 Pfam Myosin head (motor domain) 141 799 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci10g3066 1136 CDD MYSc_Myo8 153 799 IPR036022 -
Prci10g3066 1136 PRINTS Myosin heavy chain signature 497 525 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci10g3066 1136 PRINTS Myosin heavy chain signature 265 292 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci10g3066 1136 PRINTS Myosin heavy chain signature 169 188 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci10g3066 1136 PRINTS Myosin heavy chain signature 223 248 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci10g3066 1136 PRINTS Myosin heavy chain signature 550 578 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci10g3066 1136 MobiDBLite consensus disorder prediction 1 33 - -
Prci10g3066 1136 Gene3D - 321 377 - -
Prci10g3066 1136 Gene3D - 864 906 - -
Prci10g3066 1136 Gene3D - 815 863 - -
Prci10g3066 1136 Gene3D - 509 701 - -
Prci10g3066 1136 SMART iq_5 812 834 IPR000048 GO:0005515
Prci10g3066 1136 SMART iq_5 835 857 IPR000048 GO:0005515
Prci10g3066 1136 SMART iq_5 861 883 IPR000048 GO:0005515
Prci10g3066 1136 SMART iq_5 884 906 IPR000048 GO:0005515
Prci10g3066 1136 FunFam Unconventional myosin-XIX 509 701 - -
Prci10g3066 1136 PANTHER MYOSIN 132 1132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g3066 Prci-Chr10 39126133 39154030 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g3066 1 1134 Myosins gene family AT1G50360 76.585 0.0 1780
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g3066 - K10357 gmx:100782618 1905.95