Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g3064 ATGCCGTCTGAGTTCAAGTTAACAGATAGGAAGGTTTCTGAGGAACTTCAGGATTGTGCCGGTGACATGGATTTCATCAACGAGGACTCGCCATATGGTGAAAAGAATACATCACTAGAAAGTAGGCACTCTAGTGGTGATGAAGAAGTCGATCCTATACCTCTGCCCCTTTCTTCAATCTCAAAATCTTTCTGGGAACGCAGGTGGAGTGATACAACACCTTATGCTTCAAAAATGAATGCTAAAAGTGAAAATGAGCTGATGGGAAACTATGTAGTGTTAAGTTCCTTGCCTTCAACAGTAGGAACAGGATTTAGTAAAACCAACAAGCTTCAGTCATGGTATCAACTTCCAAATGGAAATTGGGAGTTGGGGAAGATAATATCAACTTCCGGAGCTGAATCTGTTATTTCACTGCCTAATGGGAAGGTTTTAAAGGTGAAAGGTGAAAGTTTGGTCCCAGCAAATCCTGATATTCTTGATGGAGTGGATGATCTGATGCAGCTTAGTTATTTAAATGAACCTTCGGTTTTATACAATTTGCAACATAGATACAATCAAAATAGTATTTATACGAAAGCTGGGCCAATTTTGGTTGCTGTAAATCCCTTTAAGAAAGTTCTTTTGTATGGAAATGATTATATTGAAGCATACAAGCGTAAAACAAGTGAAAGCCCTCATGTATATGCCATTACAGACACAGCTATTCAGGAAATGATACGAGATGAAGTAAATCAATCCATTATTATAAGTGGTGAAAGTGGAGCTGGAAAAACTGAGACAGCAAAGATAGCAATGCAGTACTTGGCTGCTCTGGGTGGTGGAAGTGGAATAGAGTATGAGATATTGAAGACTAATCCAATACTAGAAGCCTTTGGTAATGCAAAGACATTGAGAAATGACAACTCAAGTCGTTTTGGAAAGCTCATTGAGATACACTTTAGTGAGACTGGACAGATATCGGGTGCTATCATTCAAACATTTTTGTTGGAAAAGTCTAGAGTAGTCCAATGCAATGAAGGAGAAAGGTCATATCATATATTTTATCAGCTATGTGCTGGAGCACCACCTTCTCTAAGGGAGAAGTTGAATCTACAGAGTGCAGAAGACTATAAATATCTCAGGCAGAGCAATTGCTATATGATATTTGGTGTTAATGATGCAGAGGAATTTAGCATAGTCATGGAAGCTTTGGATGTTGTCCACATCAGCAAAGAAGACCAGGAGGATGTATTTGCAATGCTTGCTGCAGTGCTATGGCTGGGAAACATATCTTTTACTGTAATTGATAATGAAAACCATGTTCAACCTGTAGAAGATGAGGCTCTGTTCAACGTTGCCAAATTGATAGGCTGTGACATTGGAAATCTTAAGTTGACTTTATCAACTCGCAACATGAAAGTTGGTAATGATAACATTGTTCAAAAGTTGAAGCTATCACAGGCCATTGATGCTAGAGATGCTTTGGCAAAGTCAATATATGCTTGCCTGTTTGATTGGTTGGTGGAGCAAATAAACAAATCACTTGCTGTTGGCAAAAGGCGTACAGGCAGATCTATCAGTATTCTAGATATATATGGGTTTGAATCATTTGATAGGAATAGTTTTGAGCAGTTCTGTATCAATTATGCAAACGAGAGATTGCAGCAACATTTCAATCGTCATTTATTCAAGTTAGAACAGGAGGAATACATACAAGATGGCATTGATTGGGCAAAAGTTGAATTTGAAGATAACCAAGACTGCCTCAATCTTTTTGAAAAGAAACCACTGGGATTACTATCTCTGTTAGATGAAGAGTCCACTTTCCCTAATGGCACAGATCTGACATTTGCTAACAAGCTTAAGCAGCATTTGAATTCTAATTCATGTTTCAGAGGAGAGCGAGGCAAGGCTTTTACTGTGTGCCACTATGCTGGGGAGGTCATGTACGACACAACTGGATTTCTGGAAAAAAACAGGGACCTATTGCACTTGGATTCCATTCAACTTCTATCGTCATGCAGGTGTCATCTTCCTCAGATATTTGCATCCTTTATGCTTACCCAGTCTGAGAAGCCTGTTGTTGGTCCCTTACACAAGTTAGGTGGAGCTGATTCTCAAAAGCTAAGTGTTGCAACAAAGTTCAAGGGTCAACTGTTCCAATTGATGCAAAGGTTGGAGGGCACTACCCCACATTTTATTCGCTGTATTAAGCCCAATAACCTCCAGTCTCCAGGATTATATGAACAAGGTCTTGTGCTACAGCAGCTAAAATGTTGTGGAGTGCTAGAAGTGGTTCGAATATCAAGATCAGGCTTCCCTACTAGAATGTCTCACCAAAAGTTTGCCAGAAGATACGGTTTTCTTCTCCTTGAGAATGTTGCATCTCAGGATCCACTTGGTGTTTCAGTTGCAATTCTTCATCAGTTTAATATTTTGCCTGATATGTATCAAGTTGGCTACACAAAATTATTTTTCCGAACAGGCCAGATTGGAATACTTGAAGATACCAGAAATCGTACCCTTCATGGCATTTTACGTGTCCAAAGTTTCTTCAGGGGTCACCAAACTCGGTGTTACCTGAAGGAACTTCGCAGAGGAATCATTACTCTTCAGTCTTTTATTAGGGGGGAGAACATCAGAAACGAATTTGCAGCTTCACTTCGGAGACATAGAGCTGCTGTCCTTATACAAAAGCGGATGAAAGCAATATTTGTAAGAAACAGAACGAAGAATACTAATGAAGCTGCAATTGTTATACAATCGATCATTCGTGGCTGGTTAGTCAGAAGATGCTCAGGAGATTTAGGATCATTGAAATCTGAAGGCGTGAAGACAAATGAATCGGATGAGGTACTGGTCAAGTCTTCTTTCTTAGCTGAATTACAGCGTCGGGTGCTCAAGGCAGAAGCTGCACTGAGGGACAAAGAAGAGGAGAATGACATCCTCCACCAACGTCTCCAACAGTATGAAAGCCGTTGGTCTGAGTATGAATTGAAGATGAAGTCCATGGAAGAAGTGTGGCAAAAACAAATGAGATCCCTACAGTCCAGCCTCTCCATTGCAAAGAAGAGCCTTGCAATTGATGATTCAGAAAGGAACTCAGATGCATCCGTCAATGCAAGTGATGAAAGAGATTACAGCTGGGATATAGGAAATAACCATGGACGCCAAGAAAGCAATGGAACAAGGTCAATGAGCGCAGGCTTGAGTGTTATAAGTCGGTTGGCTGAAGAATTTGAGCAGCGGAGTCAAGTATTTGGTGATGATGCCAAGTTCTTGGTGGAGGTAAAATCTGGTCAAGTTGAAGCAAGTTTAAATCCAGACCAGGAGCTCAGAAGGTTGAAGCAGATGTTTGAAGCTTGGAAAAAGGATTATGGTGCAAGACTACGTGAAACCAAGGTCATTTTACATAAGCTTGGAACTGAAGAAGGTGCACTTGACAAAGTGAAGAGGAAATGGTGGGGAAGAAGGAACAGTTCAAGGATAAATTGA 3477 0.4035 MPSEFKLTDRKVSEELQDCAGDMDFINEDSPYGEKNTSLESRHSSGDEEVDPIPLPLSSISKSFWERRWSDTTPYASKMNAKSENELMGNYVVLSSLPSTVGTGFSKTNKLQSWYQLPNGNWELGKIISTSGAESVISLPNGKVLKVKGESLVPANPDILDGVDDLMQLSYLNEPSVLYNLQHRYNQNSIYTKAGPILVAVNPFKKVLLYGNDYIEAYKRKTSESPHVYAITDTAIQEMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGQISGAIIQTFLLEKSRVVQCNEGERSYHIFYQLCAGAPPSLREKLNLQSAEDYKYLRQSNCYMIFGVNDAEEFSIVMEALDVVHISKEDQEDVFAMLAAVLWLGNISFTVIDNENHVQPVEDEALFNVAKLIGCDIGNLKLTLSTRNMKVGNDNIVQKLKLSQAIDARDALAKSIYACLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVEFEDNQDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNSCFRGERGKAFTVCHYAGEVMYDTTGFLEKNRDLLHLDSIQLLSSCRCHLPQIFASFMLTQSEKPVVGPLHKLGGADSQKLSVATKFKGQLFQLMQRLEGTTPHFIRCIKPNNLQSPGLYEQGLVLQQLKCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLENVASQDPLGVSVAILHQFNILPDMYQVGYTKLFFRTGQIGILEDTRNRTLHGILRVQSFFRGHQTRCYLKELRRGIITLQSFIRGENIRNEFAASLRRHRAAVLIQKRMKAIFVRNRTKNTNEAAIVIQSIIRGWLVRRCSGDLGSLKSEGVKTNESDEVLVKSSFLAELQRRVLKAEAALRDKEEENDILHQRLQQYESRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAIDDSERNSDASVNASDERDYSWDIGNNHGRQESNGTRSMSAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVEASLNPDQELRRLKQMFEAWKKDYGARLRETKVILHKLGTEEGALDKVKRKWWGRRNSSRIN 1158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g3064 1158 SMART MYSc_2a 155 834 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci10g3064 1158 ProSiteProfiles IQ motif profile. 858 887 IPR000048 GO:0005515
Prci10g3064 1158 ProSiteProfiles Myosin motor domain profile. 161 833 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci10g3064 1158 ProSiteProfiles IQ motif profile. 837 864 IPR000048 GO:0005515
Prci10g3064 1158 FunFam Unconventional myosin-XIX 531 723 - -
Prci10g3064 1158 FunFam Myosin heavy chain 343 399 - -
Prci10g3064 1158 CDD MYSc_Myo8 175 821 IPR036022 -
Prci10g3064 1158 Gene3D - 343 399 - -
Prci10g3064 1158 Gene3D - 531 723 - -
Prci10g3064 1158 PANTHER MYOSIN 154 1154 - -
Prci10g3064 1158 PRINTS Myosin heavy chain signature 572 600 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci10g3064 1158 PRINTS Myosin heavy chain signature 191 210 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci10g3064 1158 PRINTS Myosin heavy chain signature 245 270 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci10g3064 1158 PRINTS Myosin heavy chain signature 519 547 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci10g3064 1158 PRINTS Myosin heavy chain signature 287 314 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci10g3064 1158 Pfam IQ calmodulin-binding motif 839 856 IPR000048 GO:0005515
Prci10g3064 1158 Pfam IQ calmodulin-binding motif 909 925 IPR000048 GO:0005515
Prci10g3064 1158 Gene3D - 767 834 - -
Prci10g3064 1158 Gene3D Myosin VI head, motor domain, U50 subdomain 400 508 - -
Prci10g3064 1158 Coils Coil 953 1001 - -
Prci10g3064 1158 Gene3D - 837 885 - -
Prci10g3064 1158 Gene3D - 886 928 - -
Prci10g3064 1158 Gene3D Kinesin motor domain 160 766 IPR036961 -
Prci10g3064 1158 Pfam Myosin head (motor domain) 163 821 IPR001609 GO:0003774|GO:0005524|GO:0016459
Prci10g3064 1158 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 878 IPR027417 -
Prci10g3064 1158 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 108 157 IPR004009 GO:0003774|GO:0005524|GO:0016459
Prci10g3064 1158 MobiDBLite consensus disorder prediction 19 52 - -
Prci10g3064 1158 ProSiteProfiles IQ motif profile. 907 936 IPR000048 GO:0005515
Prci10g3064 1158 SMART iq_5 834 856 IPR000048 GO:0005515
Prci10g3064 1158 SMART iq_5 906 928 IPR000048 GO:0005515
Prci10g3064 1158 SMART iq_5 857 879 IPR000048 GO:0005515
Prci10g3064 1158 SMART iq_5 883 905 IPR000048 GO:0005515
Prci10g3064 1158 MobiDBLite consensus disorder prediction 1026 1059 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g3064 Prci-Chr10 39126133 39154031 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g3064 1 1156 Myosins gene family AT1G50360 74.342 0.0 1783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g3064 - - gmx:100801124 1914.04