Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g3050 ATGTCAGAGTCCAATGCAATGGCCAATGGGCTGGCCGGTGCAGGCGGTGGCATCATTGCTCAAATCATAACTTATCCTCTTCAAACGGTAAATACTCGCCAGCAAACCGAGAGAACGCTCAAGGGCAAGAAGCTGGGCCTTCCTCATTCCCCTAACACGCTTCTTCAGATCCTCCAGGTTGTTAGAAGCGAGGGTTGGGGCGGGCTATACAGTGGCCTCAAGCCTTCTCTCCTTGGTACCGCTGCTTCTCAGGGCATTTACTACTATTTTTATCAAATTTTTAAAAATAAGGCTGTGGCCATTGCTGCTGCCCGTAAAGTCAAAGGACGTGGAGATGGTACTGTTGGCATGCTTGGTTGGCTTGTTGTGGCTGCTATTGCTGGGTCCTTGAATGTTTTGTTTACAAACCCACTATGGGTTATAGTGACTCGCATGCAGACACATACTCAAGCAGAAAGAAAAATTATGGAGGGAAAGAAAGAAGCTTTGCGCAGAGAAGCATCAGAAAGCAGTTCTGCCGGTTCAACATTACAAGACAAATTAGCTGAACTGGAATCTATAAAACCTCAACCATATGGAACTCTACATGCAGCAAATGAAATCTATAGTGAAGCAAGTATCGCTGGATTTTGGAAGGGTGTCATCCCTTCTTTGATTATGGTGTGCAATCCCTCAATCCAATTTATGATTTATGAGAGCTCGTTAAAGCATTTAAAGGCAAAACGCACGGCTAAGAATCAGGGGAATAAAAATGTAACTGCTTTTGAGGTCTTTTTGCTGGGAGCCCTTGCAAAACTTGGAGCAACGGTCTCAACATATCCCTTGTTGGTTGTTAAGTCAAGGCTTCAAGCCAAACAAGAGATTGGTGGAAGTAGCTCGTTAAGATACTCAGGTACTTTTGATGCAATACTTAAAATTATCCGTTACGAGGGATTACCTGGATTTTACAAGGGGATGAGCACAAAGATAGTACAGAGTGTTTTTGCTGCTTCTGTTCTATTCATGGTCAAGGAGGAACTTGTTAAGGCTTACATGGTGTTGGCAGATAAGAGCAAGACACTTGTCTTAAAAAGTTGA 1077 0.4364 MSESNAMANGLAGAGGGIIAQIITYPLQTVNTRQQTERTLKGKKLGLPHSPNTLLQILQVVRSEGWGGLYSGLKPSLLGTAASQGIYYYFYQIFKNKAVAIAAARKVKGRGDGTVGMLGWLVVAAIAGSLNVLFTNPLWVIVTRMQTHTQAERKIMEGKKEALRREASESSSAGSTLQDKLAELESIKPQPYGTLHAANEIYSEASIAGFWKGVIPSLIMVCNPSIQFMIYESSLKHLKAKRTAKNQGNKNVTAFEVFLLGALAKLGATVSTYPLLVVKSRLQAKQEIGGSSSLRYSGTFDAILKIIRYEGLPGFYKGMSTKIVQSVFAASVLFMVKEELVKAYMVLADKSKTLVLKS 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g3050 358 Gene3D Mitochondrial carrier domain 100 346 IPR023395 -
Prci10g3050 358 Pfam Mitochondrial carrier protein 4 96 IPR018108 -
Prci10g3050 358 Pfam Mitochondrial carrier protein 251 344 IPR018108 -
Prci10g3050 358 Pfam Mitochondrial carrier protein 116 239 IPR018108 -
Prci10g3050 358 ProSiteProfiles Solute carrier (Solcar) repeat profile. 252 343 IPR018108 -
Prci10g3050 358 ProSiteProfiles Solute carrier (Solcar) repeat profile. 115 237 IPR018108 -
Prci10g3050 358 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 5 347 IPR044712 GO:0006862|GO:0055085
Prci10g3050 358 SUPERFAMILY Mitochondrial carrier 5 339 IPR023395 -
Prci10g3050 358 ProSiteProfiles Solute carrier (Solcar) repeat profile. 4 97 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g3050 Prci-Chr10 39041077 39045867 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g3050 26 344 Chloroplast and Mitochondria Gene Families AT1G25380 26.444 4.66e-30 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g3050 K13354 - gmx:100775304 558.525