Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g3049 ATGTCAGAGTCCAATGCAATGGCCAATGGGCTGGCCGGTGCAGGCGGTGGCATCATTGCTCAAATCATAACTTATCCTCTTCAAACGGTAAATACTCGCCAGCAAACCGAGAGAACGCTCAAGGGCAAGAAGCTGGGCCTTCCTCATTCCCCTAACACGCTTCTTCAGATCCTCCAGGTTGTTAGAAGCGAGGGTTGGGGCGGGCTATACAGTGGCCTCAAGCCTTCTCTCCTTGGTACCGCTGCTTCTCAGGGCATTTACTACTATTTTTATCAAATTTTTAAAAATAAGGCTGTGGCCATTGCTGCTGCCCGTAAAGTCAAAGGACGTGGAGATGGTACTGTTGGCATGCTTGGTTGGCTTGTTGTGGCTGCTATTGCTGGGTCCTTGAATGTTTTGTTTACAAACCCACTATGGGTTATAGTGACTCGCATGCAGACACATACTCAAGCAGAAAGAAAAATTATGGAGGGAAAGAAAGAAGCTTTGCGCAGAGAAGCATCAGAAAGCAGTTCTGCCGGTTCAACATTACAAGACAAATTAGCTGAACTGGAATCTATAAAACCTCAACCATATGGAACTCTACATGCAGCAAATGAAATCTATAGTGAAGCAAGTATCGCTGGATTTTGGAAGGGTGTCATCCCTTCTTTGATTATGGTCTTTTTGCTGGGAGCCCTTGCAAAACTTGGAGCAACGGTCTCAACATATCCCTTGTTGGTTGTTAAGTCAAGGCTTCAAGCCAAACAAGAGATTGGTGGAAGTAGCTCGTTAAGATACTCAGGTACTTTTGATGCAATACTTAAAATTATCCGTTACGAGGGATTACCTGGATTTTACAAGGGGATGAGCACAAAGATAGTACAGAGTGTTTTTGCTGCTTCTGTTCTATTCATGGTCAAGGAGGAACTTGTTAAGGCTTACATGGTGTTGGCAGATAAGAGCAAGACACTTGTCTTAAAAAGTTGA 969 0.4427 MSESNAMANGLAGAGGGIIAQIITYPLQTVNTRQQTERTLKGKKLGLPHSPNTLLQILQVVRSEGWGGLYSGLKPSLLGTAASQGIYYYFYQIFKNKAVAIAAARKVKGRGDGTVGMLGWLVVAAIAGSLNVLFTNPLWVIVTRMQTHTQAERKIMEGKKEALRREASESSSAGSTLQDKLAELESIKPQPYGTLHAANEIYSEASIAGFWKGVIPSLIMVFLLGALAKLGATVSTYPLLVVKSRLQAKQEIGGSSSLRYSGTFDAILKIIRYEGLPGFYKGMSTKIVQSVFAASVLFMVKEELVKAYMVLADKSKTLVLKS 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g3049 322 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 5 221 IPR044712 GO:0006862|GO:0055085
Prci10g3049 322 Gene3D Mitochondrial carrier domain 222 310 IPR023395 -
Prci10g3049 322 Gene3D Mitochondrial carrier domain 1 221 IPR023395 -
Prci10g3049 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 216 307 IPR018108 -
Prci10g3049 322 SUPERFAMILY Mitochondrial carrier 5 303 IPR023395 -
Prci10g3049 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 4 97 IPR018108 -
Prci10g3049 322 Pfam Mitochondrial carrier protein 116 222 IPR018108 -
Prci10g3049 322 Pfam Mitochondrial carrier protein 4 96 IPR018108 -
Prci10g3049 322 Pfam Mitochondrial carrier protein 221 308 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g3049 Prci-Chr10 39041077 39045867 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g3049 26 308 Chloroplast and Mitochondria Gene Families AT1G25380 23.313 1.37e-21 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g3049 K13354 - gmx:100775304 482.641