Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g3043 ATGTTTTTACAGTCTGCTTCTGCTAGCTTTGACTTCTCGCAGATATTTCCTTACGTTTGCCCATGTAGTAACTTGGGTGCGATTAACGGTTCAAGGAACCAGAGTTTTCTCACCTTTCCTATGTCTAGAAGAAGAAGGAAAGGATTGATTGCCAATTCGGGGTATCGCAAATTTCGAAGGAAATGGGGATTTCTCTTGTGCGCAATGCCTACAGATGGTTCTAACCGAAACTGGAATGCTGAATTCGCAAATTCTACTGGACGGGTTGCAAAAACTTTCGTGTTGAAACGGATTTCTAATGAATTGGAGGGGGATGAATTGTCCCAAGAATCGCCGATTCAGTTGAGCTCGAACTTTACCAATTTCCGAGAAGACCCTATTGTAGATAAGCTAAGAACCCAGCTGGGAGTGATACATCCAATACCATCGCCACCAATTAACCGCAACGTGGTTGGTTTGTTTGTATTCTTTTTCTTTGTTGGGGTTGCTTTTGATAAGCTGTGGACCTCAAGGAGGAGAAGCAAGGTTGGTAGCGTAGACACTCGTCGTGGTGTGTGGCCACAGGTGCCCACCAGCTTTTCACTGTTTCTAGAGAAGGATTTGCAGAGAAAAGAGTCAGTTGAATGGGTGAACATGGTGCTGGTGAAGTTATGGAAAGTTTACAGAGCTGGGATTGAAAATTGGATCATTGGGTTGCTTCAGCCTGTTATCGACAACTTAAAGAAGCCTGACTATGTGGAAAGGGTTGAGATAAAGCAATTCTCGCTGGGGGATGAGCCATTGTCAGTTAGAAATGTGGAGCGAAGGACTTCTCGCCGGGCAAATGATTTGCAGTACCAAATAGGCCTTAGGTATACTGGTGGTGCTCGCATGCTGCTGATGCTTTCACTAAAATTTGGCATTATTCCAATTGTTGTGCCTGTTGGTGTTCGAGATTTTGACATTGATGGCGAACTATGGGTAAAATTGCGATTAATCCCAACAGAGCCTTGGGTGGGAGCTGCTTCATGGGCTTTTGTTTCACTTCCAAAGATCAAGTTTGAATTGTCACCGTTCCGTTTATTCAATTTAATGGCAATTCCGGTTCTCTCGATGTTTTTGACAAAACTCCTCACTGAAGATTTACCTCGGTTATTTGTACGTCCAAAGAAAATTGTTTTGGATTTCCAGAAGGGAAAAGCTGTTGGTCCTGTTGCTGCTGATTTAAAATCTAGAGAATTGCAAGATGGAAACAAGGATTTTGTTGGTGAACTGTCCGTCACTCTTGTTGATGCTAGAAAGCTTTCTTATTTTTTCTATGGAAAGACAGATCCGTATGTTATTCTTACCCTTGGAGATCAAACTATTCGCAGCAAAAAGAACAGTCAAACTACGGTGTTTGGTCCCCCTGGTATGCCAATATGGAACCAGGATTTTCATTTGCTGGTTAGTAACCCTAAAAAGCAGAAGTTACACATTCAAGTAAAGGATTCATTGGGATTTATAGATTTGACTGCAGGAACAGGGGAGGTTGATCTAGGATCTCTCCAAGACACTGTACCAACAGACCGGGTTGTGGTTTTGCAAGGTGGTTGGGGGTTTTTGGGAAAGGGCTCTTCTGGGGAGCTATTGCTACGGCTAACTTATAAAGCATATGTGGAGGATGAGGAAGATGACAAGACCGACTCCATTGATACAGATGCTTCAGATGATGAGTTGTCTGATTCAGAGGAATCAAGTCTTACTAATGAAAAGGGTGAAAGAGATGCTATGAGTGAAAGAGAGTCATTTATGGATGTTTTGGCAGCATTAATTGTTAGTGAAGAATTCCAAGGTATAGTGGCATCTGAAACAGGGTATGCCAAAACTTTAGATGACAGCTTAACTACAGGGTCTAATGTTTCACGGTCCAATCTTAATGTGGAACCAAACCCTTCAAATTCTGATAGTTCTAAAGGTTCTACAGTTGCAGGGTCAGCCTTATTCTGGCTCGCTGTGATCACTAGCATATCAATCCTAATTGCTGTCAATATTGGAGGTTCAAGTATTTTCAATCCTTAA 2040 0.423 MFLQSASASFDFSQIFPYVCPCSNLGAINGSRNQSFLTFPMSRRRRKGLIANSGYRKFRRKWGFLLCAMPTDGSNRNWNAEFANSTGRVAKTFVLKRISNELEGDELSQESPIQLSSNFTNFREDPIVDKLRTQLGVIHPIPSPPINRNVVGLFVFFFFVGVAFDKLWTSRRRSKVGSVDTRRGVWPQVPTSFSLFLEKDLQRKESVEWVNMVLVKLWKVYRAGIENWIIGLLQPVIDNLKKPDYVERVEIKQFSLGDEPLSVRNVERRTSRRANDLQYQIGLRYTGGARMLLMLSLKFGIIPIVVPVGVRDFDIDGELWVKLRLIPTEPWVGAASWAFVSLPKIKFELSPFRLFNLMAIPVLSMFLTKLLTEDLPRLFVRPKKIVLDFQKGKAVGPVAADLKSRELQDGNKDFVGELSVTLVDARKLSYFFYGKTDPYVILTLGDQTIRSKKNSQTTVFGPPGMPIWNQDFHLLVSNPKKQKLHIQVKDSLGFIDLTAGTGEVDLGSLQDTVPTDRVVVLQGGWGFLGKGSSGELLLRLTYKAYVEDEEDDKTDSIDTDASDDELSDSEESSLTNEKGERDAMSERESFMDVLAALIVSEEFQGIVASETGYAKTLDDSLTTGSNVSRSNLNVEPNPSNSDSSKGSTVAGSALFWLAVITSISILIAVNIGGSSIFNP 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g3043 679 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 416 544 IPR035892 -
Prci10g3043 679 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 55 679 - -
Prci10g3043 679 CDD SMP_SF 225 388 - -
Prci10g3043 679 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 203 390 IPR031468 GO:0008289
Prci10g3043 679 MobiDBLite consensus disorder prediction 549 585 - -
Prci10g3043 679 Gene3D C2 domain 397 545 IPR035892 -
Prci10g3043 679 MobiDBLite consensus disorder prediction 571 585 - -
Prci10g3043 679 ProSiteProfiles C2 domain profile. 394 519 IPR000008 -
Prci10g3043 679 SMART C2_3c 417 518 IPR000008 -
Prci10g3043 679 MobiDBLite consensus disorder prediction 551 570 - -
Prci10g3043 679 Pfam C2 domain 416 507 IPR000008 -
Prci10g3043 679 MobiDBLite consensus disorder prediction 618 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g3043 Prci-Chr10 38961404 38973444 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g3043 407 509 C2H2 Transcription Factor Family AT4G05330 33.333 6.53e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g3043 - - qsa:O6P43_032342 1018.45