Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g3027 ATGGGCAGTTGTGGAAGGGAAGGATCGGTGAGGCAGTATATCCGATCGAAGGTCCCTCGTCTGAGATGGACGCCTGAACTTCATCGCTGCTTTGTTCGTGCCATTGACACCCTTGGAGGTCATCACAAGGCGACGCCTAAGCTTGTTCTTCAGATGATGGATGTCAAAGGTCTTACTATTTCACACGTGAAGAGCCATCTCCAGATGTACAGAAGCATGAGAAGTAATTTGGGTAGACAAGATGGGAGTTCGAGCTACCATAGAAAACAATCTTTTGAGGAACATGATGATGGGTGCGTTGATGAAGTGAATGATGCAGATGGTGGTAGAGGGATTATTCAACATTGTTCGAAATCCATGAGGAAAGAATCAGATTCCCCCAGGAGCCACAGTGATTTCTCACCTAAAAGAGCGAGAATGGAGACGAGGAGTTGCATAGCAGTGGCAGAGAGGCAAAGAACATGTGAAGCAGCAACAGTGACGAATCCGTACAGCTTTTATGATTATGTGCAGGCAACGGGTGAGCGCAAGGGAATAAAGGAGGCTTCTTCTTCTTCCTCTTCTGCTGCTGCAGCAATATCAATATGGCAGGCTCAACCCTTCTCTCATCTGCCACATTTTCCTAACCTCACTTCTTTCCACCAACAATCTGATTTTCTTCAGGGTACCGAATTGGTTAGCAGAAATGTGGGCTCAGCCGCAGGGAATAAAGATGCAGAAGAAGAGATGGAGGGGGGAGAGGGTGTGAGCTGTCACTCTCTCTCTCATTGCCAAATCAATCGTCAAAGAGAAGCAATACAATTACTAACAACGCTTCTTCGGCCAGTGAGATTAGTGAAGCCGTCTCATTCATCTCTTGTTCCTCCTCTGGCAAAGATACAATTAACCTAG 891 0.4658 MGSCGREGSVRQYIRSKVPRLRWTPELHRCFVRAIDTLGGHHKATPKLVLQMMDVKGLTISHVKSHLQMYRSMRSNLGRQDGSSSYHRKQSFEEHDDGCVDEVNDADGGRGIIQHCSKSMRKESDSPRSHSDFSPKRARMETRSCIAVAERQRTCEAATVTNPYSFYDYVQATGERKGIKEASSSSSSAAAAISIWQAQPFSHLPHFPNLTSFHQQSDFLQGTELVSRNVGSAAGNKDAEEEMEGGEGVSCHSLSHCQINRQREAIQLLTTLLRPVRLVKPSHSSLVPPLAKIQLT 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g3027 296 NCBIfam myb-like DNA-binding domain, SHAQKYF class 19 72 IPR006447 GO:0003677
Prci10g3027 296 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Prci10g3027 296 MobiDBLite consensus disorder prediction 117 139 - -
Prci10g3027 296 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 7 122 IPR046955 GO:0003700
Prci10g3027 296 FunFam Myb family transcription factor 17 75 - -
Prci10g3027 296 Gene3D - 18 75 - -
Prci10g3027 296 MobiDBLite consensus disorder prediction 76 104 - -
Prci10g3027 296 SUPERFAMILY Homeodomain-like 17 74 IPR009057 -
Prci10g3027 296 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g3027 Prci-Chr10 38806558 38810485 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g3027 1 77 G2-like Transcription Factor Family AT1G14600 71.951 2.19e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Prci10g3027 Myb_DNA-binding 2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g3027 - - pcin:129323143 587.415