Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g3016 ATGAAGAAGACTCTCTTCCAAGAATTGTCAAGGCTCCATTGTTTATCAAGTCATGCTCAACGGCTATTATACTTGTTTGTAGCTAGCGCAGGATATGGATCAGATCACTCTGTTGTGGTCGATATTTTCAAAACAATAAAGTCATCAAATGGATTAACAGTTGCTATTATCTTGAAGCCGTTTGTCTTTGAAGGGTTGAGGCGACGAGATGAGGTCAAAAATTTGGTAGAGAAACTAAAGGAGAACACAGATTTACTTATTGAAATTGATACTGATTCACTACTCAAAAAGGACTTGGTTACTCTAGATGAAGCTATGAAAACTGCAAATGATGCAGTTTTGTTGGCCATTAATGTCATATCTGTTCTCAAATCAGATATGCACAGGAAACTTGTGGATGGCTTGCGCAGTGGCATCAAAGAAATCAGTATTTTGGAAATTAATGAAATATTTGCACGCTATAAGGAAGCTAGAATTGGATTTGGAGCAGCATATAACATGAAAACTTCCATTCTACGGTCTTTGCTTGATTGTCCTTTCCTTGGTGTTAGTTTGAAGGACTCAAATGGCATGGTTATATGCAATCTCACAAGTTCAGTTCCTATCAATGAGAATGATACTGCTGCCTTTCTACATACTTTCCGCCAAACAACAGAATACACAAAGGACATAATAGTATTTACAAACCATGAGCCTAATCTTGAGCCAAACCTCCTAATCACTACTGTTCTTGCACTGGGCAGCATAAATGTGCAACAGTCTTCCCTGAGTGGTGGCATGCTTTCTAGACTTGCCCGGCATTTTCCTCTTTTCAGCTTTTGGGGAAAACATCAACAGCAACCAGCTGACACTAGGAAAGAGAATGAATCTGAAAGTATATCTCTTTCTCAAGTCACTGAATTGTATGAATTTAATGATGGGGATAGAATTGATTCTGATGTGATAGATGACAAGTTCAACAAGGACTTTGAATCTTCAGAGCCACTAGTGAGTAACAAAACTACAAAGTCAAATGCATTGAGGTGTTCTGAACAAAACAGAGGAGAACAATTTGACACAAGTTCTGATTTTTCCAGCCTTTACGATGAAATTATTAGAGGTGACCTTGCATGTCAAAGGGAGAAACTCATAAATTGGAATCTTGGTCCTGGATATGAGGTGGCACAAGAGTGGGCCAAAGAAAGGGCAGCTGATGGTACTTCTTCGATGGCTGATAATGTTAACATCTTCAACCTTCCTGTTGGTGTAAGATCTTCAGAACAGTTGAAAGACTGTTCAGAAGCTTCCATGGCACAAGAGCCAGTGACTGAAAATGATGTCAACGTGCCTAATAAAAGCATGTCTTGGAGTGCATTGACTGATGCAGGTCTGGAAGCGGTGCTGGATTTTGCATCTACACTTTTAAATGGAAAGTATGCGAACAAATCAAACAAGCAAGGGGTTCTTTCTGTTCGAGCAGCATCAATGCTGGAAGCAGAACGAGATTCGTCAAAAAAATGGATCCCAATTGTGGAAATGCAATATAGAGGAGGTCAATACAAGGGACGATGCCAAGGAGGTCTACCTGAAGGGAAGGGGCGACTTGTCCTTGGAGATGGAAGTATATATGACGGCACATGGCGCTATGGTAAGAGATCTGGTCCTGGGACTTTCTATTTCATCAATGGCGACGTGTTCCAAGGATCATGGAGGGACGATCTTATGCACGGCAAGGGTTGGTTTTATTTTCACACAGGGGATAGGTGGTTTGCTAACTTTTGGAAGGGAAAGGCAAATGGTGAAAGCCGTTTCTACACAAAGAATGGGGACGCCTTCTTTGGCAGTTTTGAAGATGGATGGCGACATGGGCAATTTCTATGCATTAATGCTAAAGGAAGAAGGTACATTGAGGTCTGGGAATATGGTGTTATTCTAGAAAGCAGGCATTTAGACAAAGATGATGGAGAAGAGTGA 1953 0.4081 MKKTLFQELSRLHCLSSHAQRLLYLFVASAGYGSDHSVVVDIFKTIKSSNGLTVAIILKPFVFEGLRRRDEVKNLVEKLKENTDLLIEIDTDSLLKKDLVTLDEAMKTANDAVLLAINVISVLKSDMHRKLVDGLRSGIKEISILEINEIFARYKEARIGFGAAYNMKTSILRSLLDCPFLGVSLKDSNGMVICNLTSSVPINENDTAAFLHTFRQTTEYTKDIIVFTNHEPNLEPNLLITTVLALGSINVQQSSLSGGMLSRLARHFPLFSFWGKHQQQPADTRKENESESISLSQVTELYEFNDGDRIDSDVIDDKFNKDFESSEPLVSNKTTKSNALRCSEQNRGEQFDTSSDFSSLYDEIIRGDLACQREKLINWNLGPGYEVAQEWAKERAADGTSSMADNVNIFNLPVGVRSSEQLKDCSEASMAQEPVTENDVNVPNKSMSWSALTDAGLEAVLDFASTLLNGKYANKSNKQGVLSVRAASMLEAERDSSKKWIPIVEMQYRGGQYKGRCQGGLPEGKGRLVLGDGSIYDGTWRYGKRSGPGTFYFINGDVFQGSWRDDLMHGKGWFYFHTGDRWFANFWKGKANGESRFYTKNGDAFFGSFEDGWRHGQFLCINAKGRRYIEVWEYGVILESRHLDKDDGEE 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g3016 650 Gene3D - 568 631 - -
Prci10g3016 650 SUPERFAMILY Tubulin nucleotide-binding domain-like 24 121 IPR036525 -
Prci10g3016 650 PANTHER RADIAL SPOKE HEAD 1 HOMOLOG 19 637 - -
Prci10g3016 650 Gene3D Tubulin/FtsZ, GTPase domain 6 247 IPR036525 -
Prci10g3016 650 SMART morn 534 555 IPR003409 -
Prci10g3016 650 SMART morn 557 578 IPR003409 -
Prci10g3016 650 SMART morn 511 532 IPR003409 -
Prci10g3016 650 Pfam MORN repeat 518 534 IPR003409 -
Prci10g3016 650 Pfam MORN repeat 559 581 IPR003409 -
Prci10g3016 650 Pfam MORN repeat 536 558 IPR003409 -
Prci10g3016 650 Gene3D - 511 567 - -
Prci10g3016 650 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 510 635 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g3016 Prci-Chr10 38625628 38633918 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g3016 24 647 PP2C-type Phosphatase Gene Family AT1G75010 48.089 0.0 553
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g3016 - - gsj:114371951 815.068