Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g3015 ATGGAGCTTCCTGCATTTACCAGCTTCGACGCAATTTCTAAGGTTTCATTATTCCCAGTTTCTTCCAAACAAGTTTTGTATAGAAACACTGTTCGTTGCCGGAACATTGGGTTCCTCTGGTGTCGAAATTCAAAATCTTTTGCTGGAATCACCATGAGTTCAGACGAATATTCCTTCTCAAATGATTCTGGACTAAGACACAGCCTTGGAACAAAATCTGGAGTTATCGACGTGATTAGCATTGGCTGCAGGAAGGACGCAGTTCTAGATTTCTGCTTGAAGTCGCCTTTTCAGTTATCGTCGCTGCGATTTTGGAATACTGTTATGAAGGAATCTCAAGAGGTTCAATTACAACTAAGGTCTTATGAAGAAGACTCTCTTCCAAGAATTGTCAAGGCTCCATTGTTTATCAAGTCATGCTCAACGGCTATTATACTTGTAGCTAGCGCAGGATATGGATCAGATCACTCTGTTGTGGTCGATATTTTCAAAACAATAAAGTCATCAAATGGATTAACAGTTGCTATTATCTTGAAGCCGTTTGTCTTTGAAGGGTTGAGGCGACGAGATGAGGTCAAAAATTTGGTAGAGAAACTAAAGGAGAACACAGATTTACTTATTGAAATTGATACTGATTCACTACTCAAAAAGGACTTGGTTACTCTAGATGAAGCTATGAAAACTGCAAATGATGCAGTTTTGTTGGCCATTAATGTCATATCTGTTCTCAAATCAGATATGCACAGGAAACTTGTGGATGGCTTGCGCAGTGGCATCAAAGAAATCAGTATTTTGGAAATTAATGAAATATTTGCACGCTATAAGGAAGCTAGAATTGGATTTGGAGCAGCATATAACATGAAAACTTCCATTCTACGGTCTTTGCTTGATTGTCCTTTCCTTGGTGTTAGTTTGAAGGACTCAAATGGCATGGTTATATGCAATCTCACAAGTTCAGTTCCTATCAATGAGAATGATACTGCTGCCTTTCTACATACTTTCCGCCAAACAACAGAATACACAAAGGACATAATAGTATTTACAAACCATGAGCCTAATCTTGAGCCAAACCTCCTAATCACTACTGTTCTTGCACTGGGCATAAATGTGCAACAGTCTTCCCTGAGTGGTGGCATGCTTTCTAGACTTGCCCGGCATTTTCCTCTTTTCAGCTTTTGGGGAAAACATCAACAGCAACCAGCTGACACTAGGAAAGAGAATGAATCTGAAAGTATATCTCTTTCTCAAGTCACTGAATTGTATGAATTTAATGATGGGGATAGAATTGATTCTGATGTGATAGATGACAAGTTCAACAAGGACTTTGAATCTTCAGAGCCACTAGTGAGTAACAAAACTACAAAGTCAAATGCATTGAGGTGTTCTGAACAAAACAGAGGAGAACAATTTGACACAAGTTCTGATTTTTCCAGCCTTTACGATGAAATTATTAGAGGTGACCTTGCATGTCAAAGGGAGAAACTCATAAATTGGAATCTTGGTCCTGGATATGAGGTGGCACAAGAGTGGGCCAAAGAAAGGGCAGCTGATGGTACTTCTTCGATGGCTGATAATGTTAACATCTTCAACCTTCCTGTTGGTGTAAGATCTTCAGAACAGTTGAAAGACTGTTCAGAAGCTTCCATGGCACAAGAGCCAGTGACTGAAAATGATGTCAACGTGCCTAATAAAAGCATGTCTTGGAGTGCATTGACTGATGCAGGTCTGGAAGCGGTGCTGGATTTTGCATCTACACTTTTAAATGGAAAGTATGCGAACAAATCAAACAAGCAAGGGGTTCTTTCTGTTCGAGCAGCATCAATGCTGGAAGCAGAACGAGATTCGTCAAAAAAATGGATCCCAATTGTGGAAATGCAATATAGAGGAGGTCAATACAAGGGACGATGCCAAGGAGGTCTACCTGAAGGGAAGGGGCGACTTGTCCTTGGAGATGGAAGTATATATGACGGCACATGGCGCTATGGTAAGAGATCTGGTCCTGGGACTTTCTATTTCATCAATGGCGACGTGTTCCAAGGATCATGGAGGGACGATCTTATGCACGGCAAGGGTTGGTTTTATTTTCACACAGGGGATAGGTGGTTTGCTAACTTTTGGAAGGGAAAGGCAAATGGTGAAAGCCGTTTCTACACAAAGAATGGGGACGCCTTCTTTGGCAGTTTTGAAGATGGATGGCGACATGGGCAATTTCTATGCATTAATGCTAAAGGAAGAAGGTACATTGAGGTCTGGGAATATGGTGTTATTCTAGAAAGCAGGCATTTAGACAAAGATGATGGAGAAGAGTGA 2310 0.4087 MELPAFTSFDAISKVSLFPVSSKQVLYRNTVRCRNIGFLWCRNSKSFAGITMSSDEYSFSNDSGLRHSLGTKSGVIDVISIGCRKDAVLDFCLKSPFQLSSLRFWNTVMKESQEVQLQLRSYEEDSLPRIVKAPLFIKSCSTAIILVASAGYGSDHSVVVDIFKTIKSSNGLTVAIILKPFVFEGLRRRDEVKNLVEKLKENTDLLIEIDTDSLLKKDLVTLDEAMKTANDAVLLAINVISVLKSDMHRKLVDGLRSGIKEISILEINEIFARYKEARIGFGAAYNMKTSILRSLLDCPFLGVSLKDSNGMVICNLTSSVPINENDTAAFLHTFRQTTEYTKDIIVFTNHEPNLEPNLLITTVLALGINVQQSSLSGGMLSRLARHFPLFSFWGKHQQQPADTRKENESESISLSQVTELYEFNDGDRIDSDVIDDKFNKDFESSEPLVSNKTTKSNALRCSEQNRGEQFDTSSDFSSLYDEIIRGDLACQREKLINWNLGPGYEVAQEWAKERAADGTSSMADNVNIFNLPVGVRSSEQLKDCSEASMAQEPVTENDVNVPNKSMSWSALTDAGLEAVLDFASTLLNGKYANKSNKQGVLSVRAASMLEAERDSSKKWIPIVEMQYRGGQYKGRCQGGLPEGKGRLVLGDGSIYDGTWRYGKRSGPGTFYFINGDVFQGSWRDDLMHGKGWFYFHTGDRWFANFWKGKANGESRFYTKNGDAFFGSFEDGWRHGQFLCINAKGRRYIEVWEYGVILESRHLDKDDGEE 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g3015 769 Gene3D Tubulin/FtsZ, GTPase domain 110 369 IPR036525 -
Prci10g3015 769 SMART morn 630 651 IPR003409 -
Prci10g3015 769 SMART morn 676 697 IPR003409 -
Prci10g3015 769 SMART morn 653 674 IPR003409 -
Prci10g3015 769 Pfam MORN repeat 678 700 IPR003409 -
Prci10g3015 769 Pfam MORN repeat 655 677 IPR003409 -
Prci10g3015 769 Pfam MORN repeat 637 653 IPR003409 -
Prci10g3015 769 Gene3D - 630 684 - -
Prci10g3015 769 SUPERFAMILY Tubulin nucleotide-binding domain-like 78 241 IPR036525 -
Prci10g3015 769 Gene3D - 685 753 - -
Prci10g3015 769 PANTHER RADIAL SPOKE HEAD 1 HOMOLOG 100 756 - -
Prci10g3015 769 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 629 754 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g3015 Prci-Chr10 38625155 38633918 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g3015 76 766 PP2C-type Phosphatase Gene Family AT1G75010 46.763 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g3015 - - gsj:114371951 951.429