Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g3014 ATGGAGCTTCCTGCATTTACCAGCTTCGACGCAATTTCTAAGGTTTCATTATTCCCAGTTTCTTCCAAACAAGTTTTGTATAGAAACACTGTTCGTTGCCGGAACATTGGGTTCCTCTGGTGTCGAAATTCAAAATCTTTTGCTGGAATCACCATGAGTTCAGACGAATATTCCTTCTCAAATGATTCTGGACTAAGACACAGCCTTGGAACAAAATCTGGAGTTATCGACGTGATTAGCATTGGCTGCAGGAAGGACGCAGTTCTAGATTTCTGCTTGAAGTCGCCTTTTCAGTTATCGTCGCTGCGATTTTGGAATACTGTTATGAAGGAATCTCAAGAGGTTCAATTACAACTAAGGTCTTATGAAGAAGACTCTCTTCCAAGAATTGTCAAGGCTCCATTGTTTATCAAGTCATGCTCAACGGCTATTATACTTGTAGCTAGCGCAGGATATGGATCAGATCACTCTGTTGTGGTCGATATTTTCAAAACAATAAAGTCATCAAATGGATTAACAGTTGCTATTATCTTGAAGCCGTTTGTCTTTGAAGGGTTGAGGCGACGAGATGAGGTCAAAAATTTGGTAGAGAAACTAAAGGAGAACACAGATTTACTTATTGAAATTGATACTGATTCACTACTCAAAAAGGACTTGGTTACTCTAGATGAAGCTATGAAAACTGCAAATGATGCAGTTTTGTTGGCCATTAATGTCATATCTGTTCTCAAATCAGATATGCACAGGAAACTTGTGGATGGCTTGCGCAGTGGCATCAAAGAAATCAGTATTTTGGAAATTAATGAAATATTTGCACGCTATAAGGAAGCTAGAATTGGATTTGGAGCAGCATATAACATGAAAACTTCCATTCTACGGTCTTTGCTTGATTGTCCTTTCCTTGGTGTTAGTTTGAAGGACTCAAATGGCATGGTTATATGCAATCTCACAAGTTCAGTTCCTATCAATGAGAATGATACTGCTGCCTTTCTACATACTTTCCGCCAAACAACAGAATACACAAAGGACATAATAGTATTTACAAACCATGAGCCTAATCTTGAGCCAAACCTCCTAATCACTACTGTTCTTGCACTGGGCAGCATAAATGTGCAACAGTCTTCCCTGAGTGGTGGCATGCTTTCTAGACTTGCCCGGCATTTTCCTCTTTTCAGCTTTTGGGGAAAACATCAACAGCAACCAGCTGACACTAGGAAAGAGAATGAATCTGAAAATGACAAGTTCAACAAGGACTTTGAATCTTCAGAGCCACTAGTGAGTAACAAAACTACAAAGTCAAATGCATTGAGGTGTTCTGAACAAAACAGAGGAGAACAATTTGACACAAGTTCTGATTTTTCCAGCCTTTACGATGAAATTATTAGAGGTGACCTTGCATGTCAAAGGGAGAAACTCATAAATTGGAATCTTGGTCCTGGATATGAGGTGGCACAAGAGTGGGCCAAAGAAAGGGCAGCTGATGGTACTTCTTCGATGGCTGATAATGTTAACATCTTCAACCTTCCTGTTGGTGTAAGATCTTCAGAACAGTTGAAAGACTGTTCAGAAGCTTCCATGGCACAAGAGCCAGTGACTGAAAATGATGTCAACGTGCCTAATAAAAGCATGTCTTGGAGTGCATTGACTGATGCAGGTCTGGAAGCGGTGCTGGATTTTGCATCTACACTTTTAAATGGAAAGTATGCGAACAAATCAAACAAGCAAGGGGTTCTTTCTGTTCGAGCAGCATCAATGCTGGAAGCAGAACGAGATTCGTCAAAAAAATGGATCCCAATTGTGGAAATGCAATATAGAGGAGGTCAATACAAGGGACGATGCCAAGGAGGTCTACCTGAAGGGAAGGGGCGACTTGTCCTTGGAGATGGAAGTATATATGACGGCACATGGCGCTATGGTAAGAGATCTGGTCCTGGGACTTTCTATTTCATCAATGGCGACGTGTTCCAAGGATCATGGAGGGACGATCTTATGCACGGCAAGGGTTGGTTTTATTTTCACACAGGGGATAGGTGGTTTGCTAACTTTTGGAAGGGAAAGGCAAATGGTGAAAGCCGTTTCTACACAAAGAATGGGGACGCCTTCTTTGGCAGTTTTGAAGATGGATGGCGACATGGGCAATTTCTATGCATTAATGCTAAAGGAAGAAGGTACATTGAGGTCTGGGAATATGGTGTTATTCTAGAAAGCAGGCATTTAGACAAAGATGATGGAGAAGAGTGA 2241 0.4119 MELPAFTSFDAISKVSLFPVSSKQVLYRNTVRCRNIGFLWCRNSKSFAGITMSSDEYSFSNDSGLRHSLGTKSGVIDVISIGCRKDAVLDFCLKSPFQLSSLRFWNTVMKESQEVQLQLRSYEEDSLPRIVKAPLFIKSCSTAIILVASAGYGSDHSVVVDIFKTIKSSNGLTVAIILKPFVFEGLRRRDEVKNLVEKLKENTDLLIEIDTDSLLKKDLVTLDEAMKTANDAVLLAINVISVLKSDMHRKLVDGLRSGIKEISILEINEIFARYKEARIGFGAAYNMKTSILRSLLDCPFLGVSLKDSNGMVICNLTSSVPINENDTAAFLHTFRQTTEYTKDIIVFTNHEPNLEPNLLITTVLALGSINVQQSSLSGGMLSRLARHFPLFSFWGKHQQQPADTRKENESENDKFNKDFESSEPLVSNKTTKSNALRCSEQNRGEQFDTSSDFSSLYDEIIRGDLACQREKLINWNLGPGYEVAQEWAKERAADGTSSMADNVNIFNLPVGVRSSEQLKDCSEASMAQEPVTENDVNVPNKSMSWSALTDAGLEAVLDFASTLLNGKYANKSNKQGVLSVRAASMLEAERDSSKKWIPIVEMQYRGGQYKGRCQGGLPEGKGRLVLGDGSIYDGTWRYGKRSGPGTFYFINGDVFQGSWRDDLMHGKGWFYFHTGDRWFANFWKGKANGESRFYTKNGDAFFGSFEDGWRHGQFLCINAKGRRYIEVWEYGVILESRHLDKDDGEE 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g3014 746 MobiDBLite consensus disorder prediction 399 446 - -
Prci10g3014 746 Pfam MORN repeat 655 677 IPR003409 -
Prci10g3014 746 Pfam MORN repeat 614 630 IPR003409 -
Prci10g3014 746 Pfam MORN repeat 632 654 IPR003409 -
Prci10g3014 746 Gene3D Tubulin/FtsZ, GTPase domain 110 367 IPR036525 -
Prci10g3014 746 Gene3D - 607 661 - -
Prci10g3014 746 MobiDBLite consensus disorder prediction 421 446 - -
Prci10g3014 746 SUPERFAMILY Tubulin nucleotide-binding domain-like 78 241 IPR036525 -
Prci10g3014 746 SMART morn 653 674 IPR003409 -
Prci10g3014 746 SMART morn 607 628 IPR003409 -
Prci10g3014 746 SMART morn 630 651 IPR003409 -
Prci10g3014 746 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 606 731 - -
Prci10g3014 746 Gene3D - 662 729 - -
Prci10g3014 746 PANTHER RADIAL SPOKE HEAD 1 HOMOLOG 100 733 - -
Prci10g3014 746 MobiDBLite consensus disorder prediction 400 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g3014 Prci-Chr10 38625155 38633918 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g3014 76 743 PP2C-type Phosphatase Gene Family AT1G75010 46.812 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g3014 - - gsj:114371951 945.266