Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g3002 ATGGAGAACCACCCACTTCAGCTTTTTCGCTATCATGCTCTCTCGCTCCTCTTTCTCATGGCTTCTCTTTTCTTCCCTCTCACCCACCAACTTCCAGCTTCATCATCCCTCAAGACTGATGCGCAGGCTCTTCTCATGTTCAAGAAGACGATCCAGAAGGACCCTGACAGAGTCTTGTCCACCTGGCAGCTCACCAGAGATCCCTGTACCTGGTATGGAGTTTCCTGCACTGCAAGACGTGTCACTCAGCTTGATCTCAGTGATAAGAATCTCGTTGGGACTTCTTTAGGTCCCTTGTCTTCTTTAGATATGCTGTCTGTTCTGAATTTGCATTTGAACTCTTTCCCTGTAAATTCCACTTCTTTGCTTGACCTTCCTTACAGTTTGACACAGCTTGATCTGTCCTTTACTGGAGTTTCAGGTCCTCTTCCTGAGAATTTTTTCTCCAAGTGTCCCAATCTTGTAGTTGTCAATCTTTCTTACAACAACTTGACAGGTCCTGTGCCTGAAAACTTCTTGCAGAACTCTGATAAGCTTCAGTCTCTCGATATCTCTTCAAACAACTTGACAGGGTCGATATCGAACTTGAAAATTGAGTGCAGTTCCTTGTTGTTTCTTGATCTCTCTGGAAACCATTTATCAGATTCAATCCCATTTTCCTTGTCAAACTGTACCAGCCTTAAGAATTTGAATTTAGCACACAATTTCATTACAGGGGCAATTCCAAAATCTCTGGGACAGCTCACTGAGCTAGAGACAATTGATCTTTCTTATAATCAGATCACTGGTTGGATTCCTTTTGAGCTGGGAAATATGTGCGCTAACCTTAAAGATCTAAGATTTGCTTTCAACAACATTTCGGGTTCGATCCCACCAACTTTTTCTGCTTGCTCTAGCCTGCAGTATCTTGACATATCTAACAACAATATGTCAGGGCCATTACCAGGTGGAATCTTTCAGAACCTACAGTCAATTCAGGAACTGTATTTGGGAAACAATGCTATCTCAGGACCGTTTCCGTCTTCAATATCATCATGCAAAAATTTGAGGATTTTGGACTTAAGCTCTAACAAAATCTCAGGATTTATTCCCCGAGATATATGTCCAGGGGCAGCATCACTTGAGCAGATTAGAATGCCAGATAATCTCATCACTGGAGAAATTCCTGCTGAGCTCTCAAAATGTTCCCAGTTGAAGACTATTGATTTTAGTCTGAATTATCTCAATGGCTCAATCCCTCCAGAGCTTGGACAGCTTGAGAATCTTCAGCAGTTGATAGCATGGTTCAATGGGTTGGAAGGAAAAATCCCGCCAGAATTAGGTAAATGCAAAAGTCTGAAGGATCTTATACTGAATAATAATCAGCTAAGTGGTGAAATTCCTGTTGAGTTATTCAATTGCAGCAATCTTGAATGGATTTCGCTGACAAGCAATGGACTCACCGGTCAAATACCGCGTGAATTTGGCCAGTTGACTCGATTAGCAGTTTTGCAGTTGGGAAACAACAGCTTGACGGGAGAGATACCAGGAGAGCTAGCTAATTGTAGCAGTTTGGTGTGGCTGGACTTAAACAGTAACAAGCTCACTGGAGAGATCCCACCAAGACTTGGCAGGCAGCTTGGAGCAAAATCATTGTTTGGGATTCTTTCAGGGAACACATTAGTGTTCGTAAGAAATGTGGGAAACTCATGTAAAGGAGTTGGAGGTTTGCTAGAGTTTTCCGGAATCAGACCAGAAAGACTTCAGCAGGTGCCAACATTGAGGACTTGTGATTTCACGAGATTGTATTCTGGTCCAGTCCTGAGCTATTTTACCAAGTACCAGACTTTGGAGTATCTAGATCTTTCATACAACGAGCTTCGTGGGAGAATCCCAGAAGAATTTGGGGACATGGTGGCTTTACAGGTTCTTGAATTGTCTCACAACCAGTTATCAGGAGAGATTCCCTCATCACTTGGCCAGCTTAAGAACTTAGGTGTCTTCGATGCATCACATAATAGGCTGCAAGGTCATATCCCCGATTCATTCTCAAACCTATCATTTCTGGTGCAGATTGATCTGTCTAACAATGAGTTAACCGGGCAAATTCCATCTAGAGGACAACTGAGTACACTGCCAGCTAGCCAGTATGCAAACAACCCGGGACTTTGTGGCGTTCCACTGCCTGAATGTCAGAACGATAACAGCCAACCAGCAACAAATCCAAGTGCAGATGAGAGCAAAGGTGGCCATAAGGGAGCAACAGGATCATGGGCAAATAGCATTGTGATGGGAGTTCTCATTTCCATCGCTTCTGTATGTATCTTAATTGTGTGGGCGATTGCAATGCGTGCAAGGAGGAAGGAGGCTGAGGAAGTTAAGATGCTTAGTAGCTTGCAAGCATCTCATGCTGCCACAACATGGAAAATTGACAAGGAGAAAGAGCCTTTGAGCATTAATGTGGCAACATTTCAGAGACAACTGAGGAAGCTCAAGTTCTCACAATTGATTGAAGCAACTAACGGCTTCTCAGCAGCTAGCCTCATTGGGTGTGGTGGGTTTGGAGAAGTGTTCAGGGCCACACTAAAGGATGGCTCAAGTGTTGCAATTAAAAAGCTCATTCGATTGAGCTGTCAAGGAGATCGAGAATTCATGGCAGAGATGGAAACCTTAGGGAAGATCAAGCATAGAAATCTTGTCCCTTTATTGGGATACTGTAAAGTTGGTGAAGAGAGGCTTCTGGTTTATGAATACATGGAGTATGGAAGCCTTGAAGAAATGCTCCATGGGAGAACAAAGACACGAGATAGGAGAATTCTAACATGGGAAGAAAGGAAGAAGATTGCAAGAGGTGCTGCAAAAGGACTTTGTTTCCTACACCACAATTGCATCCCACACATAATACACAGAGACATGAAATCAAGCAATGTACTACTTGACCATGAAATGGAGGCCAGGGTTTCAGACTTTGGAATGGCAAGACTAATAAGTGCTCTTGACACTCATCTAAGTGTCAGCACACTAGCAGGGACACCTGGATATGTTCCACCAGAGTACTACCAAAGTTTCCGGTGCACTGCAAAGGGCGATGTCTATTCCTTTGGAGTTGTCATGCTGGAACTTCTTTCTGGGAAGCGCCCTACTGATAAAGAGGATTTTGGTGACACTAACTTGGTGGGATGGGCCAAAATGAAGGTACGTGAAGGTAAACAAAAGGAAGTGATAGATCCTGAGTTACTTTTGATGACTAAAGGAACAGATGAAGCAGAGGTCAAAGAGGTGAAAGAGATGATGAGGTATTTAGATATAACATTACAGTGTGTTGATGATTTTGCTTCCAAGAGGCCAAACATGTTGCAGGTAGTGGCCATGTTGAGAGAGTTGATGCCTGGATCAGCGGATGGAAGCAGCAACAGTGCTTGA 3402 0.4345 MENHPLQLFRYHALSLLFLMASLFFPLTHQLPASSSLKTDAQALLMFKKTIQKDPDRVLSTWQLTRDPCTWYGVSCTARRVTQLDLSDKNLVGTSLGPLSSLDMLSVLNLHLNSFPVNSTSLLDLPYSLTQLDLSFTGVSGPLPENFFSKCPNLVVVNLSYNNLTGPVPENFLQNSDKLQSLDISSNNLTGSISNLKIECSSLLFLDLSGNHLSDSIPFSLSNCTSLKNLNLAHNFITGAIPKSLGQLTELETIDLSYNQITGWIPFELGNMCANLKDLRFAFNNISGSIPPTFSACSSLQYLDISNNNMSGPLPGGIFQNLQSIQELYLGNNAISGPFPSSISSCKNLRILDLSSNKISGFIPRDICPGAASLEQIRMPDNLITGEIPAELSKCSQLKTIDFSLNYLNGSIPPELGQLENLQQLIAWFNGLEGKIPPELGKCKSLKDLILNNNQLSGEIPVELFNCSNLEWISLTSNGLTGQIPREFGQLTRLAVLQLGNNSLTGEIPGELANCSSLVWLDLNSNKLTGEIPPRLGRQLGAKSLFGILSGNTLVFVRNVGNSCKGVGGLLEFSGIRPERLQQVPTLRTCDFTRLYSGPVLSYFTKYQTLEYLDLSYNELRGRIPEEFGDMVALQVLELSHNQLSGEIPSSLGQLKNLGVFDASHNRLQGHIPDSFSNLSFLVQIDLSNNELTGQIPSRGQLSTLPASQYANNPGLCGVPLPECQNDNSQPATNPSADESKGGHKGATGSWANSIVMGVLISIASVCILIVWAIAMRARRKEAEEVKMLSSLQASHAATTWKIDKEKEPLSINVATFQRQLRKLKFSQLIEATNGFSAASLIGCGGFGEVFRATLKDGSSVAIKKLIRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKVGEERLLVYEYMEYGSLEEMLHGRTKTRDRRILTWEERKKIARGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDHEMEARVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSFGVVMLELLSGKRPTDKEDFGDTNLVGWAKMKVREGKQKEVIDPELLLMTKGTDEAEVKEVKEMMRYLDITLQCVDDFASKRPNMLQVVAMLRELMPGSADGSSNSA 1133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g3002 1133 Gene3D Transferase(Phosphotransferase) domain 1 912 1129 - -
Prci10g3002 1133 ProSitePatterns Serine/Threonine protein kinases active-site signature. 960 972 IPR008271 GO:0004672|GO:0006468
Prci10g3002 1133 Gene3D Phosphorylase Kinase; domain 1 794 911 - -
Prci10g3002 1133 ProSiteProfiles Leucine-rich repeat profile. 348 369 IPR001611 GO:0005515
Prci10g3002 1133 FunFam serine/threonine-protein kinase BRI1-like 2 797 911 - -
Prci10g3002 1133 FunFam serine/threonine-protein kinase BRI1-like 2 39 149 - -
Prci10g3002 1133 ProSiteProfiles Protein kinase domain profile. 836 1122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g3002 1133 SUPERFAMILY Protein kinase-like (PK-like) 817 1118 IPR011009 -
Prci10g3002 1133 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
Prci10g3002 1133 ProSitePatterns Protein kinases ATP-binding region signature. 842 865 IPR017441 GO:0005524
Prci10g3002 1133 MobiDBLite consensus disorder prediction 721 745 - -
Prci10g3002 1133 SMART serkin_6 836 1122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g3002 1133 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 198 272 - -
Prci10g3002 1133 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 368 555 - -
Prci10g3002 1133 FunFam serine/threonine-protein kinase BRI1-like 2 912 1129 - -
Prci10g3002 1133 Pfam Brassinosteroid receptor island domain 546 604 IPR045381 -
Prci10g3002 1133 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 273 363 - -
Prci10g3002 1133 Pfam Leucine rich repeat 206 261 IPR001611 GO:0005515
Prci10g3002 1133 Pfam Leucine rich repeat 275 335 IPR001611 GO:0005515
Prci10g3002 1133 Pfam Leucine rich repeat 603 644 IPR001611 GO:0005515
Prci10g3002 1133 Pfam Leucine rich repeat 468 528 IPR001611 GO:0005515
Prci10g3002 1133 SUPERFAMILY L domain-like 59 384 - -
Prci10g3002 1133 ProSiteProfiles Leucine-rich repeat profile. 178 200 IPR001611 GO:0005515
Prci10g3002 1133 Gene3D - 549 605 - -
Prci10g3002 1133 Pfam Leucine Rich Repeat 348 368 IPR001611 GO:0005515
Prci10g3002 1133 Pfam Leucine Rich Repeat 178 195 IPR001611 GO:0005515
Prci10g3002 1133 Gene3D Ribonuclease Inhibitor 82 724 IPR032675 -
Prci10g3002 1133 SMART LRR_typ_2 491 515 IPR003591 -
Prci10g3002 1133 SMART LRR_typ_2 322 346 IPR003591 -
Prci10g3002 1133 SMART LRR_typ_2 444 467 IPR003591 -
Prci10g3002 1133 SMART LRR_typ_2 516 539 IPR003591 -
Prci10g3002 1133 SMART LRR_typ_2 419 443 IPR003591 -
Prci10g3002 1133 SMART LRR_typ_2 347 370 IPR003591 -
Prci10g3002 1133 SMART LRR_typ_2 297 321 IPR003591 -
Prci10g3002 1133 SMART LRR_typ_2 200 224 IPR003591 -
Prci10g3002 1133 SMART LRR_typ_2 631 655 IPR003591 -
Prci10g3002 1133 SMART LRR_typ_2 248 271 IPR003591 -
Prci10g3002 1133 CDD STKc_IRAK 842 1121 - -
Prci10g3002 1133 SUPERFAMILY L domain-like 272 720 - -
Prci10g3002 1133 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 570 728 - -
Prci10g3002 1133 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 412 1120 - -
Prci10g3002 1133 Pfam Protein tyrosine and serine/threonine kinase 840 1117 IPR001245 GO:0004672|GO:0006468
Prci10g3002 1133 PRINTS Leucine-rich repeat signature 248 261 - -
Prci10g3002 1133 PRINTS Leucine-rich repeat signature 179 192 - -
Prci10g3002 1133 SMART LRR_sd22_2 655 681 - -
Prci10g3002 1133 SMART LRR_sd22_2 176 198 - -
Prci10g3002 1133 SMART LRR_sd22_2 322 337 - -
Prci10g3002 1133 SMART LRR_sd22_2 248 269 - -
Prci10g3002 1133 SMART LRR_sd22_2 346 361 - -
Prci10g3002 1133 MobiDBLite consensus disorder prediction 723 737 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g3002 Prci-Chr10 38564826 38568651 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g3002 44 1121 Receptor kinase-like Gene Family AT1G55610 49.330 0.0 1010
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Prci10g3002 PK_Tyr_Ser-Thr 2.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g3002 - - gmx:100789959 1919.82