Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2964 ATGGCTCGTTCTTTGAATCAACTTGTTTCTTTCATCTTCGTCGTCTTCCTCCTCCTTCTGGCCTCAGCAGGGATGGGGCCAAGAATGGTGGCAGAAGCAAGAACATGCGAGTCAAAGAGCCAACGCTTTAGAGGGATTTGTGTGAGGTCCTCTAACTGTGCCTCTGTCTGCCAGTCGGAGGGCTTTTCCGATGGCCATTGCCGTGGCTTCCGCCGTCGTTGTTTCTGTAGCAAACAATGCTGA 243 0.5185 MARSLNQLVSFIFVVFLLLLASAGMGPRMVAEARTCESKSQRFRGICVRSSNCASVCQSEGFSDGHCRGFRRRCFCSKQC 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2964 80 PRINTS Purothionin signature 35 50 IPR008176 GO:0006952
Prci10g2964 80 PRINTS Purothionin signature 65 79 IPR008176 GO:0006952
Prci10g2964 80 CDD Knot1 45 76 IPR003614 GO:0006952
Prci10g2964 80 SUPERFAMILY Scorpion toxin-like 34 80 IPR036574 -
Prci10g2964 80 Gene3D - 34 80 IPR036574 -
Prci10g2964 80 SMART gth_4 35 80 IPR003614 GO:0006952
Prci10g2964 80 ProSitePatterns Gamma-thionins family signature. 34 57 IPR008176 GO:0006952
Prci10g2964 80 PANTHER DEFENSIN-LIKE PROTEIN 1 12 77 - -
Prci10g2964 80 Pfam Gamma-thionin family 34 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2964 Prci-Chr10 38201751 38202817 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2964 7 80 Plant Defensins Gene Families AT2G02100 56.757 2.66e-27 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2964 - - qsa:O6P43_026022 102.834