Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2927 ATGGTTTCTTTCCGTGCTCTCAGATCTTCAAAGCTCATCTCATGGAAACCGACTGGCGGGCTTCAGCAAACCCTAGCAGGTTGTGTAGAGCGGCGAGGCAATACTTTACACTCTGGAAAGTCTTCAGTAGTCAAACTGTGTCCTGGATTTGTAGGAGAAGGGAGGTATTTCGATTTTCGGTCCAATTCGATACCAGCGTTGATTGATTTTGCTCACGAGTCACCTCTCTGCACCACATTGTGTAAAGACGGTTTCAGAGTACGAACTGTTGAGCACTTGCTTTCTGCTTTGGAGGCTTCTGGTGTTGATAACTGCAGAATTGAGATAGAAAATTTAGATTGTGAAGGAGATTGTGCTGAGATCCCTATATTTGATGGATCAGCCAGTGAATGGGTGGCAGCAGTGGAAGAAGTTGGTTTAAAGGCAGCAATTGATCACCAGGGCATTAGTTGTGAAAAATTAGCTCCACATTTGAACGAACCAACGTATGTTTTTAGGAATGATTCTTTCGTTGCTGCATTTCCTTCAACAATGGTTCAAATAACTTATGGCATCAACTTTCCACAGGCACGCGCTATTGGATGCCAGTGGTTTTCAACTCCCTTGGACAGTTTACTTTATTCCAAACAGATAGCTTTATCAAGAACCTTCTGCATTTATGAGGAGATTGAACAAATGCGCATTGCTGGACTGATTAAAGGAGGTGGTCTAGATAATGCCATTGTCTGCAGTGCCCATAATGGTTGGTTGAATCCACCTTTGCGTTTCAATGATGAACCATGTCGTCATAAGGTCCTAGATCTTATTGGAGATCTTTCCCTTTTTGCTCAGTTTGGGAATCAAGGACTTCCAGTGGCACACGTTGTAGCTTACAAGGCGGGCCATGCATTGCATGCTGATCTGGTACGCCGCTTAATAGGAGCTATTTGA 930 0.4376 MVSFRALRSSKLISWKPTGGLQQTLAGCVERRGNTLHSGKSSVVKLCPGFVGEGRYFDFRSNSIPALIDFAHESPLCTTLCKDGFRVRTVEHLLSALEASGVDNCRIEIENLDCEGDCAEIPIFDGSASEWVAAVEEVGLKAAIDHQGISCEKLAPHLNEPTYVFRNDSFVAAFPSTMVQITYGINFPQARAIGCQWFSTPLDSLLYSKQIALSRTFCIYEEIEQMRIAGLIKGGGLDNAIVCSAHNGWLNPPLRFNDEPCRHKVLDLIGDLSLFAQFGNQGLPVAHVVAYKAGHALHADLVRRLIGAI 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2927 309 SUPERFAMILY Ribosomal protein S5 domain 2-like 21 141 IPR020568 -
Prci10g2927 309 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 22 306 IPR004463 GO:0008759|GO:0009245
Prci10g2927 309 Gene3D lpxc deacetylase, domain 2 157 308 IPR011334 GO:0008759|GO:0009245
Prci10g2927 309 Gene3D lpxc deacetylase, domain 1 21 147 IPR015870 GO:0008759|GO:0009245
Prci10g2927 309 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 4 306 IPR004463 GO:0008759|GO:0009245
Prci10g2927 309 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Prci10g2927 309 NCBIfam UDP-3-O-acyl-N-acetylglucosamine deacetylase 22 306 IPR004463 GO:0008759|GO:0009245
Prci10g2927 309 SUPERFAMILY Ribosomal protein S5 domain 2-like 161 306 IPR020568 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2927 2 305 Carbohydrate Esterase AT1G25054 63.607 6.09e-143 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2927 K02535 - gmx:100814465 481.1