Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2913 ATGCCTCGCAAGCCACTTATTCAAAAACCACCAAAGAATAATCAGAATGATGCCGTGGTGATGAACATTCTTAAAAAGGCGATCAATGCCCCACCTAGTCTCAGATGGACAGACACTGACATCTGCAAATGGCAACATGTGGATTGCAACTCTGGAAAACGTGTGATTTCCATACAGATCGGGAACATGAATTTGCAAGGTTCGCTTCCGAAAGAACTTGAGAACCTCTCAGAGTTGCAACGATTTGACTGTCCACAGAACGGTCTCACAGGTCCAGTTCCATATCTATCTAAAAACTTGCAAAGACTCGTGATCCGAGATAACAAGTTCAGCTCCATCCCTAATGATTTCTTCAAGGGGATGACAATGTTACAAGAAGTAAGAATTGGAAATAACCCATTTTCGCCATGGTCTATCCCGGATAGTCTTGAGGATTGTGCAGCACTCCAGACATTTGTAGCAACAAATGCAAGTTTGGTTGGAACAATCCCAGATTTTTTAGGTACCATGCCCGGTTTAGTTTCTTTACTCCTGAATTTTAACAGTCTTGAAGGTGGGTTGCCTACAACCTTTGCGAAGAGTTCAATGGAGGAACTTTTCTTGAATGCACAAAACGGTAATTATAAACTTAATGGCACGATTAATGTGCTGCAGAACATGACATCCTTAAAACAAGTTTGGCTTCATAGTAATTCATTTACGGGTCCAATACCAGACTTGTCAAACCATGATCAGTTGTCTGATGTGAGTTTAAGGGACAACCAATTGGCTTGCGCTGTCCCATCATCTCTCATGTCTCTCCCAAGTTTAAAAGTTGTGAATTTGACTAACAATTTTCTTCAAGGCCCCACCCCAGTATTCAAATCAGGTGTGATTGTTGATATGTCTGGGATTAATCGGTTCTGCACAAACTTCCCAAATCAGCCATGCAGTCCTCTTGTGAATGCTTTAGTCTCTGTTGTTGAACCCTTGGGATGTCCTGTGAAATTGGCTGATAATTGGAAGGGCAATGATCCCTGTAATGGTAGTTGGACAGGAATTGTGTGCGCTGGAGGTAATATTTCAATCATAAATTTTCAAAACATGGGCTTGTCAGGCACAATTTCCCCTAATTTTGCCTCCCTTGCTTCTGTCACAGAATTGCTTCTTGCTAATAATTCACTCACAGGTCCAATACCAAAGGAGCTCACTACCATGCCTAACCTAGAAAAGCTAGATGTTTCAAATAACAACTTAGGTGGTTACGTGCCATCTTTTCGTCAACAAGGTTTGGATCTTAAAATAGATGGGAATCCTGATCTTGGAAAACCTCTTAAATCATCTAGCTCAGATTCTGGAGGTAATGGTGGCCGTGAGTCTAACAAACTCACTGCACTCATTGTCAGCATTGTAGTTGGCTTAGCAATTTTACTTGCTATAGCATCTCTGGTGTTCTTTAGGCGTTTTAAAAAGCGTAATTATTCAGGCATCTTTGGAGGTCTGATAGCAAAGCTAATTGGTCCTCGTAATGGTGGAGGTGGAAAAGTCACGAAGAATGTTAATGTTTCAGTAGGTGCTAGTGCTACTGGTCAGGGTAATGTCCAAGGTATGATAATTCCAATTCAAGTTCTAAGAGAAGTCACTAACAATTTCAATAATGCAAACATACTAGGAAAGGGTGGTTTTGGCACTGTGTACAAAGGTGAACTGTATGATGGAAAAAAGATAGCAGTGAAAAGAATGGAATCAGGATTGTTAATGGAGAAGGGACTGAGTGAATTCAGAGCTGAAATTGCAGTACTTACACAAGCTCGACACAAACATTTGGTGGCACTTCAGGGATATTGCTTGGATGGTAATGAGAAGCTTCTTGTGTATGAATACATGCCCCAAGGAGCACTTAGTAAGCATTTGTTTAGCTGGAAAGAGAATGGATTGGAACCTTTGGATTGGACAACAAGACTAAGCATTGCCTTGGATGTTGCTAGAGGTGTTGAGTATCTTCATGCATTGGCTCAACAAAGCTTTATTCATCGAGATCTTAAGCCATCCAACATTCTTCTTGGGGATGATATGCGAGCTAAAGTATCAGACTTCGGATTAGTCCGGCTTGCTCCTGAAGGAAGACATTCAGTTGAAACTCGGCTTGCTGGAACTTTTGGATATCTTGCACCTGAGTATGCAGCAACTGGGCGAGTCACTACAAAGGTTGATGTGTACAGTTTTGGAGTAGTTCTTATGGAGATGATAACGGGAAGGAGAGTGCTTGATGATAGCCTACCGGAAGAAGACATCCACCTGGTTACGTGGTTCGGGCGAATGATGCAGAACAATGGCTCACTTCGAAAGGTCATTGATCCTTCCATTGATGCTGATGATGAAGCAACCATGTCCAGCATTAGCACTGTTTCAGACTTGGCTGGCCATTGCTGTGCAAGTGACCCTCATCAACGTCCCAACATGGGCCATGTGGTGAGTGTATTATCTCCTCTCGTTCAAGCATGGAAGCCTCTTGAGTCTGGTTCCGATGATGGCAAGTATGGCCTTGAGTTGGATTTGAGTTTGCCTCAAGCGCTCAGAAAGTGGCAGTCTTTGGAAGGAAAGAGCACAATGGTGGAAGGATCCGGTTCTCAATCATTTGTCACAAAATAA 2631 0.4242 MPRKPLIQKPPKNNQNDAVVMNILKKAINAPPSLRWTDTDICKWQHVDCNSGKRVISIQIGNMNLQGSLPKELENLSELQRFDCPQNGLTGPVPYLSKNLQRLVIRDNKFSSIPNDFFKGMTMLQEVRIGNNPFSPWSIPDSLEDCAALQTFVATNASLVGTIPDFLGTMPGLVSLLLNFNSLEGGLPTTFAKSSMEELFLNAQNGNYKLNGTINVLQNMTSLKQVWLHSNSFTGPIPDLSNHDQLSDVSLRDNQLACAVPSSLMSLPSLKVVNLTNNFLQGPTPVFKSGVIVDMSGINRFCTNFPNQPCSPLVNALVSVVEPLGCPVKLADNWKGNDPCNGSWTGIVCAGGNISIINFQNMGLSGTISPNFASLASVTELLLANNSLTGPIPKELTTMPNLEKLDVSNNNLGGYVPSFRQQGLDLKIDGNPDLGKPLKSSSSDSGGNGGRESNKLTALIVSIVVGLAILLAIASLVFFRRFKKRNYSGIFGGLIAKLIGPRNGGGGKVTKNVNVSVGASATGQGNVQGMIIPIQVLREVTNNFNNANILGKGGFGTVYKGELYDGKKIAVKRMESGLLMEKGLSEFRAEIAVLTQARHKHLVALQGYCLDGNEKLLVYEYMPQGALSKHLFSWKENGLEPLDWTTRLSIALDVARGVEYLHALAQQSFIHRDLKPSNILLGDDMRAKVSDFGLVRLAPEGRHSVETRLAGTFGYLAPEYAATGRVTTKVDVYSFGVVLMEMITGRRVLDDSLPEEDIHLVTWFGRMMQNNGSLRKVIDPSIDADDEATMSSISTVSDLAGHCCASDPHQRPNMGHVVSVLSPLVQAWKPLESGSDDGKYGLELDLSLPQALRKWQSLEGKSTMVEGSGSQSFVTK 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2913 876 SUPERFAMILY L domain-like 21 419 - -
Prci10g2913 876 Gene3D Phosphorylase Kinase; domain 1 510 621 - -
Prci10g2913 876 FunFam Receptor-like kinase TMK4 15 307 - -
Prci10g2913 876 PANTHER OSJNBA0070M12.3 PROTEIN 13 863 - -
Prci10g2913 876 SMART serkin_6 544 825 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2913 876 Gene3D Transferase(Phosphotransferase) domain 1 622 836 - -
Prci10g2913 876 MobiDBLite consensus disorder prediction 430 450 - -
Prci10g2913 876 Pfam Protein kinase domain 545 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2913 876 FunFam Leucine-rich repeat receptor-like kinase 312 437 - -
Prci10g2913 876 Gene3D Ribonuclease Inhibitor 313 437 IPR032675 -
Prci10g2913 876 ProSiteProfiles Protein kinase domain profile. 544 825 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2913 876 SUPERFAMILY Protein kinase-like (PK-like) 528 821 IPR011009 -
Prci10g2913 876 ProSitePatterns Serine/Threonine protein kinases active-site signature. 669 681 IPR008271 GO:0004672|GO:0006468
Prci10g2913 876 CDD STKc_IRAK 550 824 - -
Prci10g2913 876 Gene3D Ribonuclease Inhibitor 14 304 IPR032675 -
Prci10g2913 876 ProSitePatterns Protein kinases ATP-binding region signature. 550 572 IPR017441 GO:0005524
Prci10g2913 876 Pfam Leucine Rich Repeat 401 419 IPR001611 GO:0005515
Prci10g2913 876 Pfam Leucine rich repeat N-terminal domain 17 50 IPR013210 -
Prci10g2913 876 Pfam Leucine rich repeat N-terminal domain 333 349 IPR013210 -
Prci10g2913 876 MobiDBLite consensus disorder prediction 436 450 - -
Prci10g2913 876 FunFam receptor protein kinase TMK1 622 840 - -
Prci10g2913 876 FunFam receptor-like protein kinase FERONIA 508 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2913 Prci-Chr10 37897752 37902350 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2913 55 821 Receptor kinase-like Gene Family AT5G07280 31.380 1.37e-85 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Prci10g2913 Pkinase 7.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2913 K00924 - gmx:100776064 1057.74