Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2905 ATGACAATTAGATCGAGCAGATTGAAGCGGAAACTGGAACTGGAACCCCCGCCTTGCATCAGGAAGAAGCTCCGGTCCAAGCTACATCGTCGGAGAAGATGCCAGATCTCTCCCGTCCTGCTTGGTTCTAAGAAATTCAAAGTTTCTGAGGAGAACGCCGGTTCAGTGGATTCGAGCCCTTGCTCTCGCGTTAATGGTGAAGAATCATGCAATTCGACCAGAGTATCGGTTGAGTTCGAGAGTAAAAGGAGGTCGGATTCGAGGAAGAATATAATCAACGAAGTTGGAGATCTTCGGAAGGGTAAATGCAACGAGTTCCGGAGGATTCGGAGATCTGAGAAGCAAAAGGATCGCGAGATGGAGGTATCTGAGTCTTCGTGTGTGGACTCGAATTCTGGTGTGGGTGAACAGAGGAGTCTGGTGTTGAAGTTTAGGAGTGGAACAGAATGCAAGAGTGTGAAAGAAACCGAAACAAATGAAGGTTCTGAAGCTTTTACGAAATCGGAGACTACTTGTGATCAGCAATGCTCTGCGGGAGATTCCAGATACGGCACCGCGAGTCTTCAATTCTCATCGGAGATAGCGCGAAACGATGTCGTTCCAGCAGGCTGTTGTGTTCTCGAGATGTTTGGAAAGGCAGGGGAGGAGACGTTCAGAGGAAAGGAAAACGGATCTTCGGAATTAGAGTTCTCTCAAGTTTCCGGATATCATCAAGCTAATGTGAACACAATCGAATTTAATGCGCAGTCGAGCATACAACAGGGTTCAAATCATATTGTCGATGATTCCAATCTAACTTGCACAGAGCAACTCTCGTACGGTGATGTATCAGAGTATTCTTCAAGTCAGGAGCCCGAATTTCCTGATCACTATTCAGATATCTTTCCTGAAAGCTCAGAACTAGAAATTTCGGATTACTTTACTGATTCTGGAAGTCAATTCTCAGAAGGCTCCGCTGCAGGAAATGTCTCGCCAACATTTTCTTTGTTTATTCAGTACAACAATGAGTTTTCGAGGTTGAAATCACCAGATTCTGGAATTGCTTTGCGCGTCGAGGATGATACCTCACATCAACCAGAATTCTTGAGGTTTGAAGATGCCGAGGTTGAAGACAGCTACCAAATGCTCAGAAAGAGAGAACGGAGGCAATTGTATTTGTGCAATTATGCAGAGAAGTACGGTTCCAATACCACCGAATACGGCAGTCTCGTTCTTCAGCAACGCTCGCAAATGGTCCACTGGATAGTTGAGCAATCTTGTCGAAAAGAGCTTCGGCAAGAGACGATGTTTCTTGGCGTCAGCCTTCTTGACCGGTTCCTGAGCAAAGGATACTTCAAAACCAAAAAGAACCTTCAAATTGTTGGAATAGCCTGCCTCACATTGGCCACGAGGATCGAAGAAAACCAACCTAATAACAGCGTACGGCAAAAGAATTTCTACGTAGGAAGCACCGTGTATAGTAGATGTGAAGTGGTCGCCATGGAATGGATGGTGCAAGAGGTGCTCAGTTTCCAGTGTTTTCAGCCCACCATCTACAATTTCTTATGGTTCTACCTAAAAGCTGCTGAAGCTGATGCAAAAGTGGAGAAGAGGGTCATGTTCCTGGCAATGCTGGCACTGTCAGCAGAAGAGCAGATATGCTACTGGCCATCAACAGTTGCTGCTGCACTTGTAATCCTGGGTTGCTTAGACGTCAATGAAAATGCATCCCACAAAGTCATTGGGATCCACGTGAGATCAAAAGATGAGAATTTGCACAAATGCATTGAGAGACTGGAGTGGTTGTTGCGCTATCTATGA 1800 0.4561 MTIRSSRLKRKLELEPPPCIRKKLRSKLHRRRRCQISPVLLGSKKFKVSEENAGSVDSSPCSRVNGEESCNSTRVSVEFESKRRSDSRKNIINEVGDLRKGKCNEFRRIRRSEKQKDREMEVSESSCVDSNSGVGEQRSLVLKFRSGTECKSVKETETNEGSEAFTKSETTCDQQCSAGDSRYGTASLQFSSEIARNDVVPAGCCVLEMFGKAGEETFRGKENGSSELEFSQVSGYHQANVNTIEFNAQSSIQQGSNHIVDDSNLTCTEQLSYGDVSEYSSSQEPEFPDHYSDIFPESSELEISDYFTDSGSQFSEGSAAGNVSPTFSLFIQYNNEFSRLKSPDSGIALRVEDDTSHQPEFLRFEDAEVEDSYQMLRKRERRQLYLCNYAEKYGSNTTEYGSLVLQQRSQMVHWIVEQSCRKELRQETMFLGVSLLDRFLSKGYFKTKKNLQIVGIACLTLATRIEENQPNNSVRQKNFYVGSTVYSRCEVVAMEWMVQEVLSFQCFQPTIYNFLWFYLKAAEADAKVEKRVMFLAMLALSAEEQICYWPSTVAAALVILGCLDVNENASHKVIGIHVRSKDENLHKCIERLEWLLRYL 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2905 599 Pfam Cyclin, C-terminal domain 509 593 IPR004367 -
Prci10g2905 599 Pfam Cyclin, N-terminal domain 372 505 IPR006671 -
Prci10g2905 599 CDD CYCLIN_SDS-like_rpt2 509 596 - -
Prci10g2905 599 ProSitePatterns Cyclins signature. 408 439 IPR006671 -
Prci10g2905 599 Gene3D - 398 501 - -
Prci10g2905 599 SMART cyclin_7 413 500 IPR013763 -
Prci10g2905 599 SUPERFAMILY Cyclin-like 367 505 IPR036915 -
Prci10g2905 599 Gene3D - 502 599 - -
Prci10g2905 599 PANTHER CYCLINS 316 592 IPR039361 -
Prci10g2905 599 SUPERFAMILY Cyclin-like 509 596 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2905 Prci-Chr10 37857228 37861912 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2905 406 558 Core Cell Cycle Gene Families AT1G20610 33.987 6.90e-20 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2905 K21777 - qsa:O6P43_032469 621.698