Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2895 ATGGATATGGAGGGTGGTAGGATTGGTGGATATGAAAGTGGGAGAGAAAATGACGGAGAGAAACTAAGCGATGATCATGAGGTTCTGAAAAAGATGATTTCCAGTCATCCTCTTTATGGCCTTTTGATTGAATCTCACTTCAACTGTTTGAAGGTGGGGTTAGGCGAATTTGGAGAGTTTGATATAACAGATGCTGCATGCAAGCAGAAGACAATTTCTGAGTTCAAAACAGCCACAAACAATCCAAGTTCTACAGAACTTGATCACTTCATGGAAGCATATTGCATGGCACTGAGCAGCCTGAAAGAAGCCATGGAAGAACCAACAAAAGAAACAAGAGCATTCATCAATTCAATGCACGTTGAGCTGAAGGAACTATGCAACCCGAATGATCATAATGATACTAATAATAAGCCACAAGATGCTATAGAGTGCAGCAGCAAGAAGAATCTTTGA 456 0.4057 MDMEGGRIGGYESGRENDGEKLSDDHEVLKKMISSHPLYGLLIESHFNCLKVGLGEFGEFDITDAACKQKTISEFKTATNNPSSTELDHFMEAYCMALSSLKEAMEEPTKETRAFINSMHVELKELCNPNDHNDTNNKPQDAIECSSKKNL 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2895 151 SMART KNOX1_2 27 71 IPR005540 GO:0003677|GO:0005634
Prci10g2895 151 MobiDBLite consensus disorder prediction 1 21 - -
Prci10g2895 151 MobiDBLite consensus disorder prediction 132 151 - -
Prci10g2895 151 Pfam KNOX2 domain 85 127 IPR005541 GO:0003677|GO:0005634
Prci10g2895 151 Pfam KNOX1 domain 29 53 IPR005540 GO:0003677|GO:0005634
Prci10g2895 151 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 14 130 - -
Prci10g2895 151 SMART KNOX2_2 77 128 IPR005541 GO:0003677|GO:0005634
Prci10g2895 151 MobiDBLite consensus disorder prediction 128 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2895 Prci-Chr10 37791820 37793405 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2895 25 127 Homeobox Transcription Factor Family AT4G08150 32.407 1.68e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2895 - - pcin:129321621 313.538