LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci10g2893	ATGGACGAAGAAAATAACCAGTCTGTAGTTTATGCCATGAAGGAAGGTTTATTGAACGTGGGAGGGCTTGTGATAGTGATGATGACAGTGACTACATGGATAGTGATTCACAGATGGAGCCAGAGGAAGAAGAAAGGTCCAAAGACATGGCCAATTCTGGGAGCTGCAATAGAACAACTCATGAACTATGAGAGGATGCATGATTGGCTTTTCACTTACTTGTCTCAATCTAAAACTGTGGTGGTTTCTATGCCTTTCACCACCTATACTTACATTGCTGATCCTGCCAATGTTGAACATGTCCTTAAGACCAACTTTAACAATTATCCCAAGGGTGAAGCGTATCATTCATATATGGAAGTGCTGCTTGGAGATGGGATATTCAATTCAGATGGAGAACTTTGGAGGAAACAAAGGAAGACTGCTAGCTTTGAGTTTGCTTCCAAAAATTTAAGAGATTTCAGCGCCAAAGTCTTCAGAGATTACAGCCTTAAGCTTTCTTCCATTCTCTCCACTGCTTCTTTCCTCAATCAACATGCCGATATGCAGGAGTTACTGATGAGGATGACTTTAGACTCCATATGCAAGGTTGGATTTGGTGTTGAAATAGGAAGCTTGGCTCCCAATTTACCAGAAAACAGTTTTGCTAAAGCCTTTGATGCTGCAAACATCATTGTCACACTTAGATTCATTGATCCATTCTGGAAAATCAAGAAGTTTCTGAATATAGGCTCTGAAGCAAAGCTTGATCGAAGCATCAAGGTCATTGATGATTTCACTTACTCAGTCATTCGAAGAAGAAAGGCTGAGATAGAAGAAGCCAAGAATAACGGCCTACATGATAAGATCAAACATGACATTCTATCAAGATTCATAGAACTGGAAGAGGGAACTGATGCAACAGAGAAGAGTCTGAGAGATGTGGTGTTGAACTTTGTGATTGCTGGTCGAGACACGACAGCGACAACTCTGTCATGGGCCATATACATGACCATGACACATGCTCATGTTGCTGGCAAACTTTACTTGGAGCTCAAAACTTTTGAGGAAGATCAAGCAAAACAGCGTAATGTTTCATTGCCTCGATGTGACACTGAAGATCCCCAATCATTCAACCAAAGAATAGAGCAATTTTCAGAGCTATTGACTAAAGATTCATTAGAGAGGCTGCCTTATTTGCATGCAGTCATCACAGAAACACTCAGACTCTACCCAGCAGTTCCTCAGGACCCAAAGGGCGTATTGGAGGATGACGTGTTACCAGATGGAACAAAAATAAAAGCAGGAGGAATGGTGACTTATGTTCCATACTCAATGGGAAGGATGGAGTATAACTGGGGCCCTGATGCTTCCTCCTTCATACCTGAGAGATGGTTCAAAGATGGTCTTCTCATACACGAATCTCCTTTCAAATTCACTGCTTTTCAGGCAGGGCCAAGGATATGTCTGGGAAAAGATTCAGCTTACTTACAGATGAGAATGGCATTGGCAATTTTGTGCAGATTCTATAGATTCCAATTAGTGGCTGGTCACTCAGTCAAATATCGCATGATGACTATTCTTTCAATGGCCAATGGCTTGAAGCTTACCATACATAGACGTCCTTGA	1608	0.416	MDEENNQSVVYAMKEGLLNVGGLVIVMMTVTTWIVIHRWSQRKKKGPKTWPILGAAIEQLMNYERMHDWLFTYLSQSKTVVVSMPFTTYTYIADPANVEHVLKTNFNNYPKGEAYHSYMEVLLGDGIFNSDGELWRKQRKTASFEFASKNLRDFSAKVFRDYSLKLSSILSTASFLNQHADMQELLMRMTLDSICKVGFGVEIGSLAPNLPENSFAKAFDAANIIVTLRFIDPFWKIKKFLNIGSEAKLDRSIKVIDDFTYSVIRRRKAEIEEAKNNGLHDKIKHDILSRFIELEEGTDATEKSLRDVVLNFVIAGRDTTATTLSWAIYMTMTHAHVAGKLYLELKTFEEDQAKQRNVSLPRCDTEDPQSFNQRIEQFSELLTKDSLERLPYLHAVITETLRLYPAVPQDPKGVLEDDVLPDGTKIKAGGMVTYVPYSMGRMEYNWGPDASSFIPERWFKDGLLIHESPFKFTAFQAGPRICLGKDSAYLQMRMALAILCRFYRFQLVAGHSVKYRMMTILSMANGLKLTIHRRP	535

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci10g2893	535	PANTHER	CYTOCHROME P450	33	527	-	-
	Prci10g2893	535	FunFam	Alkane hydroxylase MAH1	40	535	-	-
	Prci10g2893	535	PRINTS	E-class P450 group I signature	304	321	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Prci10g2893	535	PRINTS	E-class P450 group I signature	324	350	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Prci10g2893	535	PRINTS	E-class P450 group I signature	482	505	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Prci10g2893	535	PRINTS	E-class P450 group I signature	394	412	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Prci10g2893	535	PRINTS	E-class P450 group I signature	472	482	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Prci10g2893	535	Pfam	Cytochrome P450	46	526	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Prci10g2893	535	SUPERFAMILY	Cytochrome P450	36	534	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Prci10g2893	535	CDD	CYP86A	78	527	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci10g2893	Prci-Chr10	37771210	37774593	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci10g2893	23	534	Cytochrome P450	AT1G69500	75.385	0.0	809

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci10g2893	K20495		-	qsa:O6P43_032991	863.603

Showing 1 to 1 of 1 entries