Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2876 ATGGCCCAGGTTAATGGTGAGCAAGAAATGTGGCTTATGAATAAAGTCGTGCAACTTTGTAGGGATGTAGGATCAGAGAATGTCGCTGATCCACGACGGTTCTGCTCAAATAAAAAATTGGGATGCCGTTTTGGTTTTCTGGGTATCCTCAAGCTTCGTGTAAAAAAAGGAATCAACCTTGCAGTACGTGACAGTCGTGCAAGTGATCCTTACGTTGTTGTCACCATGCACGAACAGAAACTGAGGACTAAAGTAGTTGAAAGTGAGTGCAATCCTGAGTGGAATGATGAGCTGACATTGTATGTAAAGAGAATCGATGCTCCAATCATTCTAGCGGTGTTGGACAAAGACACGTTCACAGAGGACGACCCGATGGGGGAAGCTGAATTAGACATAAAGCCATTGCTGGAGTGTGTGAAGATGAACATGGCTTCAACTCAAGATCTTGAAGAAGGCGGCGTACTCAGGACAGTTCAACCTAGTAGGAATAACTGTCTCTCTGAGGAGAGCTTGTGCACGTGGACTGATGGAAAATTCCGACAAGAAATGTTTCTCAGACTGACAAAAGTTGAGCGAGGTGAACTGCTCGTGCAAATTGAGTGGAATGATCAAGGTTGTTTGGGATTATCCAACCTTGACTTTTAA 645 0.4419 MAQVNGEQEMWLMNKVVQLCRDVGSENVADPRRFCSNKKLGCRFGFLGILKLRVKKGINLAVRDSRASDPYVVVTMHEQKLRTKVVESECNPEWNDELTLYVKRIDAPIILAVLDKDTFTEDDPMGEAELDIKPLLECVKMNMASTQDLEEGGVLRTVQPSRNNCLSEESLCTWTDGKFRQEMFLRLTKVERGELLVQIEWNDQGCLGLSNLDF 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2876 214 ProSiteProfiles C2 domain profile. 27 145 IPR000008 -
Prci10g2876 214 Pfam C2 domain 48 136 IPR000008 -
Prci10g2876 214 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 48 146 IPR035892 -
Prci10g2876 214 Gene3D C2 domain 47 205 IPR035892 -
Prci10g2876 214 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 47 203 IPR044562 -
Prci10g2876 214 SMART C2_3c 49 144 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2876 Prci-Chr10 37539511 37542022 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2876 80 210 C2H2 Transcription Factor Family AT1G70790 48.485 3.34e-39 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2876 - - pcin:129322620 437.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g2876 10 37539511 37542022 Prci10g2876 10 37539511 37542022 ECH