Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2863 ATGGAGGCTTTCATTACTGCTGCGGCGTTCATTACGGCCAAATTGACTGTGCTCTTGTTGAAGGACCTTGTCTTTTTCAAACTCAACATCGATGAGTTGAATCAAGAAGTTGAGAGACTTTCTGCTATAGCAGGTCTTCTCGACTATACAATTGACAGTGCAAGGCGTAACGGAGAAAAAATCGATGAAGATCCTCACCGATGGATGAACAAATATAACGACCTGATGATTACAGTAGCAGAGTTCATGGATGAAGTATGGCGCGCAAGGTCGAAGCGTTCTAGATACAATTTATTAACCTGGCGTAAGCTAAGTAGAAAAGCCAGAAAGCTAAGACAAAATATCATTGAAATCGAAAGAAGAGGTGAATTTTACTGTATTTCTCCTACGTTTACTAATCCTCCAAAATTAGAGTACGATGGCATCTCAACATCCAAAGAGGTCATGAAAATGCTGAAAAATCCTTATATCCGCATAATTGGTGTGTACGGTCAAGGTGTGTCAAACACTTCTTTAACAAAGGAAGTCGCAGAAAAAGCTGAAGAAGACAAGTTATTTGATGTGGTGATTAGGGCAGTTGTAACACGAAATCAACAAATAGAGATTCTACAAAACCAAAGGAGTGAAGAGAAAGCCGGAAATAAAGATAGGCTAATATCTATGTTGATAATTTTGGATGACCTTAGGCAAGAGCTTGATCTGGGTGAAATAGAAATTCCATTGGGTGATGCTCATAGAGCAGTGTGCAAAATACTACTGACTTCAAGAGATGAAGAGGTATTATCCAGGATGGTTATGGAAGCAACCTTGCAGCTAGTTCGCAGCAATCATACCCTGAGCCGCGCATGTTCCTCTAAAATTAAAAATCAGCCACCAAAGGCAATCTCATTTTCAATGGAGACAGATGTTGGCACACCTGAGGAACTTGAGAGATCTGAGGACTTACCAGTCAAGCCTTCTTCTAATATTGCTGATAAGGCAAAAGTTTCTTATGTGGAGCCAGAGGCATATGAGGAGTCAAAGGAGTCAAGTATATTGGTAGTTGAGGACTTGAGCGAGCCTTCTAACATTGCAGATAAGCCACCAAAGGCAATCTCATTTTCAATGGAGACAGATGTTGGCACACTTGAGGAACTTGAGAGATCTGAGGACTTACCAGTCAAGCCTTCTTCTAATATTGCTGATAAGGCAAAAGTTTCTTATGTGGAACCAGAGGCATATGAGGAGTCAAAGGAGTCAAGTATATTGGTAGTTGAGGACTTAAGCGAGCCTTCTAACATTGCAGATAAGCCACCAAAGGCAATCTCATTTTCAATGGAGACAGATGTTGGCACACCTGAGGAACTTGAGAGATCTGAGGACTTACCAGTCAAGCCTTCTTCTAATATTGCTGATAAGGCAAAAGTTTCTTATGTGGAGCCAGAGGCATATGAGGAGTCAAACGAGTCAATTATATTGGTACTTAAGGACTTAAGCGAGCCTTCTAACATTGCAGATAAGTATGAAGACTCCCACTCTTCAGTTTTAGAGCCGAATCCAGGAAAACCATCCTCATCCGTAGATTCTGGCAAACGAGATGATATCACCAATGAGGAACGTGAAGATAGATCACTCATTGCCCATAGTTTTCTCTTCCCTATTGATTATGAGTTTACCAAAGAAGATTTGATCAGATTATGGATAGCGGAAGGGCTTTTTCAGAAAAATCAGAGCCCAAGGAATAGAGCAGAAGATGATGCTGGGGTCTTGTTTGACTCATTTGTGCAGCGAGAAGTAATAATTTCCTCTAGAACTGACCCGGTCTTGGATTTTCATAATCCCAACAAAAGAAGGTTGCTCTATAAATTTTCCAGATTGGCAGAATCTTTACTCAGCCCTACTATTTTTGATGCCAGATCTGTTAGAATCTCAGATGTGCCTGAAGTGGTAACGCACATGTGCATACTTTGTAAAAGCTTTGATGATACGAAGTTTAACGCTATAAAAAGGTTCAAGTATCTTCGGACTCTTTTCTTACTTCCTGATCATGGGGTCTCTTTCAAAAAAGTTCCTCGTGATCTCTTCTTGAGCCTGAAGAATTTGACATCATTGAACTTCAGTTATAGCCTTTTGTCTGAATTACCAAGTTCCATTGGGTATTTGAAATCATTACGGTATTTGGATCTCTCTCACACACCCATGAAGGAGTTGCCTGATTCGATTGACAATCTTCAAAATTTACAAACTCTGAACCTCAGAGGTTGTTTCAATCTAGTTGAGTTACCCAATGGCATGAGTAAGCTCACCAAGCTCAGGCATCTTGATTTTGATGTTATTAGACAGTTGCAATCTATGCCATCTGGAATTAGCAACTTAACTAACCTTCAAACTTTGTCAGCGTTTATTGTTGGCAAAGAAAAAGGATACAGAATTCAAGAGCTGGGAAGCATCAGAAATCTTACTGGATCATTTTGCGTTTCGAGGCTTGAGAATGTTCTAGACATAGAAGACGCTGAGGAAGCAGCTTTGATTGATAAGAATTACCTCACTACTTTGGAGCTAAGGTGGAGCGGTAAAATAGTTGAAAATATTAACACCAATGATGAGAAAATACTTGAACATCTTCAACCCACATTGCACCTACAAGAACTGCGAATACTAGACTACGGTGGTTCCAAGCTTCCAACGTGGATTAGTGACCCATTGTATGAATGTCTAGTTGATCTTTCTCTCTACAGTTTCAAAAACTGTCAGTTCCTTCCATCCCTTGGTGATTTGCCATCACTTCAGTCTCTGCACATCACAAAAATGGATGAGTTAAAGAGAATAGACCAGCTATTCTGTAGAAAGAGTAGTGGTAATTCACAGGATCATGCATTTCCTCGTCTTGAAAAACTAGTCTTTGAAGACATGCCCAAATTGGAAGAGTGGGATGGAGTAAAAAGCGGTGATTTCCCATCCTTGCATGCCCTGCGGTTGAAAAACTGCCCCAGATTGAAATCACTTCCTCGACTGTCATGCTTAAGCGAGTCCCTTAAACATTTAGAAACGAGCTACTGTCACAATATTATGCCATTTCTAGATGGACAAGAGAATGTTTCTCTTGAAACTCTTCTCATCAAGGATTGCCCGAAACTTAAAACATGCTTTGACAAATCGCAGGGCCAAGATTGGCCAAAGATAGCACATGTCCCCGTTATTTTGATTGATGATCAAGAAATCTCTTCGGTCAATTGTTGA 3219 0.4032 MEAFITAAAFITAKLTVLLLKDLVFFKLNIDELNQEVERLSAIAGLLDYTIDSARRNGEKIDEDPHRWMNKYNDLMITVAEFMDEVWRARSKRSRYNLLTWRKLSRKARKLRQNIIEIERRGEFYCISPTFTNPPKLEYDGISTSKEVMKMLKNPYIRIIGVYGQGVSNTSLTKEVAEKAEEDKLFDVVIRAVVTRNQQIEILQNQRSEEKAGNKDRLISMLIILDDLRQELDLGEIEIPLGDAHRAVCKILLTSRDEEVLSRMVMEATLQLVRSNHTLSRACSSKIKNQPPKAISFSMETDVGTPEELERSEDLPVKPSSNIADKAKVSYVEPEAYEESKESSILVVEDLSEPSNIADKPPKAISFSMETDVGTLEELERSEDLPVKPSSNIADKAKVSYVEPEAYEESKESSILVVEDLSEPSNIADKPPKAISFSMETDVGTPEELERSEDLPVKPSSNIADKAKVSYVEPEAYEESNESIILVLKDLSEPSNIADKYEDSHSSVLEPNPGKPSSSVDSGKRDDITNEEREDRSLIAHSFLFPIDYEFTKEDLIRLWIAEGLFQKNQSPRNRAEDDAGVLFDSFVQREVIISSRTDPVLDFHNPNKRRLLYKFSRLAESLLSPTIFDARSVRISDVPEVVTHMCILCKSFDDTKFNAIKRFKYLRTLFLLPDHGVSFKKVPRDLFLSLKNLTSLNFSYSLLSELPSSIGYLKSLRYLDLSHTPMKELPDSIDNLQNLQTLNLRGCFNLVELPNGMSKLTKLRHLDFDVIRQLQSMPSGISNLTNLQTLSAFIVGKEKGYRIQELGSIRNLTGSFCVSRLENVLDIEDAEEAALIDKNYLTTLELRWSGKIVENINTNDEKILEHLQPTLHLQELRILDYGGSKLPTWISDPLYECLVDLSLYSFKNCQFLPSLGDLPSLQSLHITKMDELKRIDQLFCRKSSGNSQDHAFPRLEKLVFEDMPKLEEWDGVKSGDFPSLHALRLKNCPRLKSLPRLSCLSESLKHLETSYCHNIMPFLDGQENVSLETLLIKDCPKLKTCFDKSQGQDWPKIAHVPVILIDDQEISSVNC 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2863 1072 Coils Coil 101 121 - -
Prci10g2863 1072 Gene3D Ribonuclease Inhibitor 805 1003 IPR032675 -
Prci10g2863 1072 Coils Coil 23 43 - -
Prci10g2863 1072 Gene3D - 142 270 IPR027417 -
Prci10g2863 1072 MobiDBLite consensus disorder prediction 500 532 - -
Prci10g2863 1072 Gene3D Ribonuclease Inhibitor 632 798 IPR032675 -
Prci10g2863 1072 Pfam NB-ARC domain 148 267 IPR002182 GO:0043531
Prci10g2863 1072 Pfam Leucine rich repeat 680 726 IPR001611 GO:0005515
Prci10g2863 1072 SUPERFAMILY L domain-like 652 1051 - -
Prci10g2863 1072 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 661 1040 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2863 Prci-Chr10 37405432 37411984 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2863 693 791 WRKY Transcription Factor Family AT4G12020 39.000 2.48e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2863 - K19613 pcin:129321236 2087.38