Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2861 ATGGAGGCTTTCATTACTGCTGCGGCGTTCATTACGGCCAAATTGACTGTGCTCTTGTTGAAGGACCTTGTCTTTTTCAAACTCAACATCGATGAGTTGAATCAAGAAGTTGAGAGACTTTCTGCTATAGCAGGTCTTCTCGACTATACAATTGACAGTGCAAGGCGTAACGGAGAAAAAATCGATGAAGATCCTCACCGATGGATGAACAAATATAACGACCTGATGATTACAGTAGCAGAGTTCATGGATGAAGTATGGCGCGCAAGGTCGAAGCGTTCTAGATACAATTTATTAACCTGGCGTAAGCTAAGTAGAAAAGCCAGAAAGCTAAGACAAAATATCATTGAAATCGAAAGAAGAGGTGAATTTTACTGTATTTCTCCTACGTTTACTAATCCTCCAAAATTAGAGTACGATGGCATCTCAACATCCAAAGAGGTCATGAAAATGCTGAAAAATCCTTATATCCGCATAATTGGTGTGTACGGTCAAGGTGTGTCAAACACTTCTTTAACAAAGGAAGTCGCAGAAAAAGCTGAAGAAGACAAGTTATTTGATGTGGTGATTAGGGCAGTTGTAACACGAAATCAACAAATAGAGATTCTACAAAACCAAAGGAGTGAAGAGAAAGCCGGAAATAAAGATAGGCTAATATCTATGTTGATAATTTTGGATGACCTTAGGCAAGAGCTTGATCTGGGTGAAATAGAAATTCCATTGGGTGATGCTCATAGAGCAGTGTGCAAAATACTACTGACTTCAAGAGATGAAGAGGTATTATCCAGGATGGTTATGGAAGCAACCTTGCAGCTAGTTCGCAGCAATCATACCCTGAGCCGCGCATGTTCCTCTAAAATTAAAAATCAGCCACCAAAGGCAATCTCATTTTCAATGGAGACAGATGTTGGCACACCTGAGGAACTTGAGAGATCTGAGGACTTACCAGTCAAGCCTTCTTCTAATATTGCTGATAAGGAGCCAGAGGCATATGAGGAGTCAAAGGAGTCAAGTATATTGGTAGTTGAGGACTTGAGCGAGCCTTCTAACATTGCAGATAAGCCACCAAAGGCAATCTCATTTTCAATGGAGACAGATGTTGGCACACTTGAGGAACTTGAGAGATCTGAGGACTTACCAGTCAAGCCTTCTTCTAATATTGCTGATAAGGCAAAAGTTTCTTATGTGGAACCAGAGGCATATGAGGAGTCAAAGGAGTCAAGTATATTGGTAGTTGAGGACTTAAGCGAGCCTTCTAACATTGCAGATAAGCCACCAAAGGCAATCTCATTTTCAATGGAGACAGATGTTGGCACACCTGAGGAACTTGAGAGATCTGAGGACTTACCAGTCAAGCCTTCTTCTAATATTGCTGATAAGGCAAAAGTTTCTTATGTGGAGCCAGAGGCATATGAGGAGTCAAACGAGTCAATTATATTGGTACTTAAGGACTTAAGCGAGCCTTCTAACATTGCAGATAAGTATGAAGACTCCCACTCTTCAGTTTTAGAGCCGAATCCAGGAAAACCATCCTCATCCGTAGATTCTGGCAAACGAGATGATATCACCAATGAGGAACGTGAAGATAGATCACTCATTGCCCATAGTTTTCTCTTCCCTATTGATTATGAGTTTACCAAAGAAGATTTGATCAGATTATGGATAGCGGAAGGGCTTTTTCAGAAAAATCAGAGCCCAAGGAATAGAGCAGAAGATGATGCTGGGGTCTTGTTTGACTCATTTGTGCAGCGAGAAGTAATAATTTCCTCTAGAACTGACCCGGTCTTGGATTTTCATAATCCCAACAAAAGAAGGTTGCTCTATAAATTTTCCAGATTGGCAGAATCTTTACTCAGCCCTACTATTTTTGATGCCAGATCTGTTAGAATCTCAGATGTGCCTGAAGTGGTAACGCACATGTGCATACTTTGTAAAAGCTTTGATGATACGAAGTTTAACGCTATAAAAAGGTTCAAGTATCTTCGGACTCTTTTCTTACTTCCTGATCATGGGGTCTCTTTCAAAAAAGTTCCTCGTGATCTCTTCTTGAGCCTGAAGAATTTGACATCATTGAACTTCAGTTATAGCCTTTTGTCTGAATTACCAAGTTCCATTGGGTATTTGAAATCATTACGGTATTTGGATCTCTCTCACACACCCATGAAGGAGTTGCCTGATTCGATTGACAATCTTCAAAATTTACAAACTCTGAACCTCAGAGGTTGTTTCAATCTAGTTGAGTTACCCAATGGCATGAGTAAGCTCACCAAGCTCAGGCATCTTGATTTTGATGTTATTAGACAGTTGCAATCTATGCCATCTGGAATTAGCAACTTAACTAACCTTCAAACTTTGTCAGCGTTTATTGTTGGCAAAGAAAAAGGATACAGAATTCAAGAGCTGGGAAGCATCAGAAATCTTACTGGATCATTTTGCGTTTCGAGGCTTGAGAATGTTCTAGACATAGAAGACGCTGAGGAAGCAGCTTTGATTGATAAGAATTACCTCACTACTTTGGAGCTAAGGTGGAGCGGTAAAATAGTTGAAAATATTAACACCAATGATGAGAAAATACTTGAACATCTTCAACCCACATTGCACCTACAAGAACTGCGAATACTAGACTACGGTGGTTCCAAGCTTCCAACGTGGATTAGTGACCCATTGTATGAATGTCTAGTTGATCTTTCTCTCTACAGTTTCAAAAACTGTCAGTTCCTTCCATCCCTTGGTGATTTGCCATCACTTCAGTCTCTGCACATCACAAAAATGGATGAGTTAAAGAGAATAGACCAGCTATTCTGTAGAAAGAGTAGTGGTAATTCACAGGATCATGCATTTCCTCGTCTTGAAAAACTAGTCTTTGAAGACATGCCCAAATTGGAAGAGTGGGATGGAGTAAAAAGCGGTGATTTCCCATCCTTGCATGCCCTGCGGTTGAAAAACTGCCCCAGATTGAAATCACTTCCTCGACTGTCATGCTTAAGCGAGTCCCTTAAACATTTAGAAACGAGCTACTGTCACAATATTATGCCATTTCTAGATGGACAAGAGAATGTTTCTCTTGAAACTCTTCTCATCAAGGATTGCCCGAAACTTAAAACATGCTTTGACAAATCGCAGGGCCAAGATTGGCCAAAGATAGCACATGTCCCCGTTATTTTGATTGATGATCAAGAAATCTCTTCGGTCAATTGTTGA 3201 0.4036 MEAFITAAAFITAKLTVLLLKDLVFFKLNIDELNQEVERLSAIAGLLDYTIDSARRNGEKIDEDPHRWMNKYNDLMITVAEFMDEVWRARSKRSRYNLLTWRKLSRKARKLRQNIIEIERRGEFYCISPTFTNPPKLEYDGISTSKEVMKMLKNPYIRIIGVYGQGVSNTSLTKEVAEKAEEDKLFDVVIRAVVTRNQQIEILQNQRSEEKAGNKDRLISMLIILDDLRQELDLGEIEIPLGDAHRAVCKILLTSRDEEVLSRMVMEATLQLVRSNHTLSRACSSKIKNQPPKAISFSMETDVGTPEELERSEDLPVKPSSNIADKEPEAYEESKESSILVVEDLSEPSNIADKPPKAISFSMETDVGTLEELERSEDLPVKPSSNIADKAKVSYVEPEAYEESKESSILVVEDLSEPSNIADKPPKAISFSMETDVGTPEELERSEDLPVKPSSNIADKAKVSYVEPEAYEESNESIILVLKDLSEPSNIADKYEDSHSSVLEPNPGKPSSSVDSGKRDDITNEEREDRSLIAHSFLFPIDYEFTKEDLIRLWIAEGLFQKNQSPRNRAEDDAGVLFDSFVQREVIISSRTDPVLDFHNPNKRRLLYKFSRLAESLLSPTIFDARSVRISDVPEVVTHMCILCKSFDDTKFNAIKRFKYLRTLFLLPDHGVSFKKVPRDLFLSLKNLTSLNFSYSLLSELPSSIGYLKSLRYLDLSHTPMKELPDSIDNLQNLQTLNLRGCFNLVELPNGMSKLTKLRHLDFDVIRQLQSMPSGISNLTNLQTLSAFIVGKEKGYRIQELGSIRNLTGSFCVSRLENVLDIEDAEEAALIDKNYLTTLELRWSGKIVENINTNDEKILEHLQPTLHLQELRILDYGGSKLPTWISDPLYECLVDLSLYSFKNCQFLPSLGDLPSLQSLHITKMDELKRIDQLFCRKSSGNSQDHAFPRLEKLVFEDMPKLEEWDGVKSGDFPSLHALRLKNCPRLKSLPRLSCLSESLKHLETSYCHNIMPFLDGQENVSLETLLIKDCPKLKTCFDKSQGQDWPKIAHVPVILIDDQEISSVNC 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2861 1066 Gene3D Ribonuclease Inhibitor 626 792 IPR032675 -
Prci10g2861 1066 Coils Coil 101 121 - -
Prci10g2861 1066 Pfam Leucine rich repeat 674 720 IPR001611 GO:0005515
Prci10g2861 1066 Coils Coil 23 43 - -
Prci10g2861 1066 MobiDBLite consensus disorder prediction 302 331 - -
Prci10g2861 1066 MobiDBLite consensus disorder prediction 494 526 - -
Prci10g2861 1066 Pfam NB-ARC domain 148 267 IPR002182 GO:0043531
Prci10g2861 1066 SUPERFAMILY L domain-like 646 1045 - -
Prci10g2861 1066 Gene3D Ribonuclease Inhibitor 799 997 IPR032675 -
Prci10g2861 1066 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 655 1034 - -
Prci10g2861 1066 Gene3D - 142 270 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2861 Prci-Chr10 37405432 37411985 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2861 687 785 WRKY Transcription Factor Family AT4G12020 39.000 2.94e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2861 - K19613 pcin:129321236 2070.05