Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2860 ATGGGTTCTAACCCAATAAGCGAATCTGGTTTTGTACCAGCAACATTTCAAGTTTTTCTTGAAAAATTTCTGACTTTTGCTCAGAATGAAATTGCTCTCATCTTAGATGCCGAAGAAGAATTCAAGAAGCTGAAAAGAGCAGTCCTCAAGGTTGAAGCTCTCGTGGACTGTGTCGCAATCAAGCAGCAACTGTGGTGCCATAGCAGCCAGAGGGCCGTTCAGCTTTGGCTTCGCGACCTTCAGAATGTTATACATGATGCCGATGACTTACTAGATGAGATTGACCTTGGGCTTATGAAGCTTAACTCCAACACTGACGGGGAGGAGCGGACCCAAAAGGATGAGGTAATCAATCTAGTCTTTCCTGAATTGAAAGTAGGGATTCCTCGTAAGATGGCTAATATTCGAGAGAGGCTAGAAGGCATGGCAAGGGAGATGGATGGTCTCTTTATGACTGATTTAGTCAACATCCAGCAGCCTAACTTTATCGGAGATGTGCAGACTAGCTCATTAGTGAATAAATCATTTGTGATAGGAAGGCAGACAGCTCTGAATGAGATTAAGGGACTGTTGTCGCTAGGGGAAACAACAACTTGTGATATTTCTGTTATTTCAATCGTGGGCATGGCTGGGGTTGGTAAAACCACACTTGCCCAACTTCTCTTCAATGATGATGATGTGATGAGGCAATTTTCACGCATCTGGGTGTCTGTTTCTAAGGAAGATACTGTGGAAAAGATCACACATTTAATTTTGGAGTCTATTGAACCAGAGGCAACAATGCTTCAGGTCTTGAATTTGAACGCTACTCAAACTAGACTTCAAACTGCACTTTCCGAAGTCAAGTTTCTGATTGTGTTGGATGGCATGTGGAATGAAAATGGAAGAGATTGGGATAGGCTATTATTGCCTCTCAAAGCCAATGCTAAAGGAAGCAAAATCTTAGTAACTACAAGAAGCATGATTGTTTCTAGAATTGTTTCCACAATCCCAGCCTATCATGTGAAGACTTTATCTGTTGAAGAATGTTGGAGTCTGATCAAACAAAAAGCATTCTCTTGTATAAAAGAAGACGAGCACCAAGAATATGAGAAAATCGGTTTAAAAATTGCACAAAAATGTAAGGGGTTGCCATTAGCTGCAAGAGTTATTGGAAATATTCTGCGTACTAAATTTGACAAGGAGGGATGGCAAGCTGTATTAGCAAGTAAATTATGGGACCTAGGGCATGGTGCAAATGAGCTTCTTCTTGCATTGAAAATGAGCTATGATCATTTACCTTACTCCTTGAAAAGGTTTTTCATATTGCTCAATTTTTCCTCCTGA 1326 0.408 MGSNPISESGFVPATFQVFLEKFLTFAQNEIALILDAEEEFKKLKRAVLKVEALVDCVAIKQQLWCHSSQRAVQLWLRDLQNVIHDADDLLDEIDLGLMKLNSNTDGEERTQKDEVINLVFPELKVGIPRKMANIRERLEGMAREMDGLFMTDLVNIQQPNFIGDVQTSSLVNKSFVIGRQTALNEIKGLLSLGETTTCDISVISIVGMAGVGKTTLAQLLFNDDDVMRQFSRIWVSVSKEDTVEKITHLILESIEPEATMLQVLNLNATQTRLQTALSEVKFLIVLDGMWNENGRDWDRLLLPLKANAKGSKILVTTRSMIVSRIVSTIPAYHVKTLSVEECWSLIKQKAFSCIKEDEHQEYEKIGLKIAQKCKGLPLAARVIGNILRTKFDKEGWQAVLASKLWDLGHGANELLLALKMSYDHLPYSLKRFFILLNFSS 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2860 441 Gene3D - 337 427 IPR042197 -
Prci10g2860 441 Pfam NB-ARC domain 183 424 IPR002182 GO:0043531
Prci10g2860 441 PANTHER DISEASE RESISTANCE PROTEIN RP 55 435 IPR044974 GO:0006952
Prci10g2860 441 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 167 437 IPR027417 -
Prci10g2860 441 PRINTS Disease resistance protein signature 203 218 - -
Prci10g2860 441 PRINTS Disease resistance protein signature 277 291 - -
Prci10g2860 441 PRINTS Disease resistance protein signature 374 388 - -
Prci10g2860 441 Gene3D - 16 121 - -
Prci10g2860 441 Pfam Rx N-terminal domain 18 102 IPR041118 -
Prci10g2860 441 Gene3D - 166 330 IPR027417 -
Prci10g2860 441 FunFam Probable disease resistance protein At1g61300 164 329 - -
Prci10g2860 441 Coils Coil 27 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2860 Prci-Chr10 37396606 37399872 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2860 172 389 WRKY Transcription Factor Family AT4G12020 25.333 6.09e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2860 - - pcin:129321854 863.988