Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2842 ATGTTCATCACAAGCTTGGCGAGGGAGGATTCGGACCAGTTTACAAGTGGGAATTGTGGAACGGGACAGGGGAAGCTAGAAGATGGGAGAGAGATAGCAGTGAAGAAGCTATCGGTGAGATCGAACCAGGGGAAGAAGGAGTTCATAAATGAGGCGAAACTGTTGGCGCGTGTGCAGCACCGCAATGTGGTGAATCTGTTGGGCTATTGTGTGTATGCTTCCGAGAAGCTTCTTGTCTATGAGTATCTGCCTCATCAGAGCCTTGACAAGATCATCTTTAAATCAGACAGGAGAAAAGAGCTTGATTGGCAGAAGAGGTTTGGAATAATAACAGGAATAGCTAGAGGATTGCTTTATCTTCACGAAGATTCGCACACCTGCATAATTCACAGAGACATAAAAGCTAGCAATGTTCTACTTGATGATAAATGGAATCCCAAGATCGCAGATTTTGGCATGGCTCGTCTCTACCCTGAAGATGAAACCCATGTCAAAACTCGTGTGGCTGGAACCAATGGATATATGGCTCCAGAATATTTAATGTATGGACATTTATCAACAAAATCAGATGTATTTAGTTTTGGAGTTTTGGTGCTGGAAATCATCAGCGGTCAACGAAACTTATCGTTTAATAACTTGGACATGGATGCACAGAACCTTATAGAAGGGGCATACAAGCTTTACAAAAAAGGACGAAGCTTAGAAATCATGGACACTGCAATAGCAGCATCAGCAGTGCCTGAACAAGTAGCAATGTGCATTCAACTAGGCTTGCTTTGCACTCAAGGTGATCCCAACCTCCGCCCCACCATGCACCGGGTGGTGGTGGTGTTGTCGAAGAAGCCAGGGCACTTGGAAGAGCCGACAAGACCTGGCGTGCCGGGTTCAAGATACCGAAAGCATCATAATCCTTATGCATTGTCTTCCACAGTTGGTAGTAGTTCTAGTGGATCTCGTTCACATGTTGGTGTCTCAAGCAATATCTACGACACTAGGTCAACTGCCACAGCAACTACAGCTGCCACAGCCGCAACCACAACCAACTCAGCTTCTGGAGAATTAGACCCACGTGGAAAACGTGTGATTGAGGGTTAA 1095 0.4557 MFITSLAREDSDQFTSGNCGTGQGKLEDGREIAVKKLSVRSNQGKKEFINEAKLLARVQHRNVVNLLGYCVYASEKLLVYEYLPHQSLDKIIFKSDRRKELDWQKRFGIITGIARGLLYLHEDSHTCIIHRDIKASNVLLDDKWNPKIADFGMARLYPEDETHVKTRVAGTNGYMAPEYLMYGHLSTKSDVFSFGVLVLEIISGQRNLSFNNLDMDAQNLIEGAYKLYKKGRSLEIMDTAIAASAVPEQVAMCIQLGLLCTQGDPNLRPTMHRVVVVLSKKPGHLEEPTRPGVPGSRYRKHHNPYALSSTVGSSSSGSRSHVGVSSNIYDTRSTATATTAATAATTTNSASGELDPRGKRVIEG 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2842 364 Gene3D Transferase(Phosphotransferase) domain 1 83 289 - -
Prci10g2842 364 SMART serkin_6 8 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2842 364 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 83 286 - -
Prci10g2842 364 MobiDBLite consensus disorder prediction 306 353 - -
Prci10g2842 364 CDD STKc_IRAK 24 280 - -
Prci10g2842 364 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 23 319 - -
Prci10g2842 364 Gene3D Phosphorylase Kinase; domain 1 9 82 - -
Prci10g2842 364 Pfam Protein kinase domain 26 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2842 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Prci10g2842 364 PIRSF TyrPK_CSF1-R 84 350 - -
Prci10g2842 364 PIRSF TyrPK_CSF1-R 20 88 - -
Prci10g2842 364 MobiDBLite consensus disorder prediction 283 364 - -
Prci10g2842 364 ProSiteProfiles Protein kinase domain profile. 8 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2842 364 SUPERFAMILY Protein kinase-like (PK-like) 27 297 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2842 Prci-Chr10 37058232 37063346 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2842 11 292 Receptor kinase-like Gene Family AT4G11530 50.345 7.30e-98 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci10g2842 Pkinase 9.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2842 - - zju:107429294 480.33