Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2841 ATGATCAAATCCAAAAACTTTCTTCGGAGTATTTTGAAACTTCTCAAACTCGGTTCAAGCAGAGAGAGACAGAACGAAGACGACGTTCAGAGGATTGCTGCCAAGGAGCAGAAGGTCTTTTCCTACGAAACGCTAGTTTCTGCGACGAAGAATTTCCATGTTCATCACAAGCTTGGCGAGGGAGGATTCGGACCAGTTTACAAGGGGAAGCTAGAAGATGGGAGAGAGATAGCAGTGAAGAAGCTATCGGTGAGATCGAACCAGGGGAAGAAGGAGTTCATAAATGAGGCGAAACTGTTGGCGCGTGTGCAGCACCGCAATGTGGTGAATCTGTTGGGCTATTGTGTGTATGCTTCCGAGAAGCTTCTTGTCTATGAGTATCTGCCTCATCAGAGCCTTGACAAGATCATCTTTAAATCAGACAGGAGAAAAGAGCTTGATTGGCAGAAGAGGTTTGGAATAATAACAGGAATAGCTAGAGGATTGCTTTATCTTCACGAAGATTCGCACACCTGCATAATTCACAGAGACATAAAAGCTAGCAATGTTCTACTTGATGATAAATGGAATCCCAAGATCGCAGATTTTGGCATGGCTCGTCTCTACCCTGAAGATGAAACCCATGTCAAAACTCGTGTGGCTGGAACCAATGGATATATGGCTCCAGAATATTTAATGTATGGACATTTATCAACAAAATCAGATGTATTTAGTTTTGGAGTTTTGGTGCTGGAAATCATCAGCGGTCAACGAAACTTATCGTTTAATAACTTGGACATGGATGCACAGAACCTTATAGAAGGGGCATACAAGCTTTACAAAAAAGGACGAAGCTTAGAAATCATGGACACTGCAATAGCAGCATCAGCAGTGCCTGAACAAGTAGCAATGTGCATTCAACTAGGCTTGCTTTGCACTCAAGGTGATCCCAACCTCCGCCCCACCATGCACCGGGTGGTGGTGGTGTTGTCGAAGAAGCCAGGGCACTTGGAAGAGCCGACAAGACCTGGCGTGCCGGGTTCAAGATACCGAAAGCATCATAATCCTTATGCATTGTCTTCCACAGTTGGTAGTAGTTCTAGTGGATCTCGTTCACATGTTGGTGTCTCAAGCAATATCTACGACACTAGGTCAACTGCCACAGCAACTACAGCTGCCACAGCCGCAACCACAACCAACTCAGCTTCTGGAGAATTAGACCCACGTGGAAAACGTGTGATTGAGGGTTAA 1230 0.4512 MIKSKNFLRSILKLLKLGSSRERQNEDDVQRIAAKEQKVFSYETLVSATKNFHVHHKLGEGGFGPVYKGKLEDGREIAVKKLSVRSNQGKKEFINEAKLLARVQHRNVVNLLGYCVYASEKLLVYEYLPHQSLDKIIFKSDRRKELDWQKRFGIITGIARGLLYLHEDSHTCIIHRDIKASNVLLDDKWNPKIADFGMARLYPEDETHVKTRVAGTNGYMAPEYLMYGHLSTKSDVFSFGVLVLEIISGQRNLSFNNLDMDAQNLIEGAYKLYKKGRSLEIMDTAIAASAVPEQVAMCIQLGLLCTQGDPNLRPTMHRVVVVLSKKPGHLEEPTRPGVPGSRYRKHHNPYALSSTVGSSSSGSRSHVGVSSNIYDTRSTATATTAATAATTTNSASGELDPRGKRVIEG 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2841 409 CDD STKc_IRAK 58 325 - -
Prci10g2841 409 Gene3D Transferase(Phosphotransferase) domain 1 128 334 - -
Prci10g2841 409 Pfam Protein kinase domain 52 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2841 409 SMART serkin_6 52 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2841 409 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 128 331 - -
Prci10g2841 409 ProSiteProfiles Protein kinase domain profile. 52 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci10g2841 409 FunFam Cysteine-rich receptor-like protein kinase 10 16 127 - -
Prci10g2841 409 ProSitePatterns Serine/Threonine protein kinases active-site signature. 173 185 IPR008271 GO:0004672|GO:0006468
Prci10g2841 409 MobiDBLite consensus disorder prediction 351 398 - -
Prci10g2841 409 SUPERFAMILY Protein kinase-like (PK-like) 37 342 IPR011009 -
Prci10g2841 409 MobiDBLite consensus disorder prediction 328 409 - -
Prci10g2841 409 Gene3D Phosphorylase Kinase; domain 1 15 127 - -
Prci10g2841 409 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 21 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2841 Prci-Chr10 37058232 37063417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2841 40 337 Receptor kinase-like Gene Family AT4G11530 51.505 8.51e-108 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci10g2841 Pkinase 3.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2841 - - zju:107429294 567