Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2838 ATGAAAGCCCTAATCCCTCTGATCTTCTCCCTGCTCCTTCTCGCAGCCACATTCCACCATCTCCCTCAGTCATCAGCCGCCGTCCCCGGCGACAGCGATTTCATCAGGTCAGCTTGCAACACCACCCTCTACGCTGACCTCTGCCACTCCTCCATCTCTCCCTACGCCAATGCCATCAAGCAAAACCCCAGTGCGCTGGCTCGCGTTGGCGTCGCTGTAGCTCACGCCGTGGTCCGTGGTGTAGCCACCGATGTCTCTGCTCTCTCCCGTGAAGCCAAAGGCAGAGCCGCCGGTGCTATCAACGATTGCATTTCCATCCTTGGGGACGCCGTAGATCAAATGAGTGAGTCACTCGGTCAGCTTCGACAGATAGCCGCCGGGAAAGGCGGTGATTTCAAGTTCGCCATAGACACGGTGCTGACGGAGATGAGCGCGGCACTGACGAATGAGGACACGTGTACAGACGAGTTCCAGGATGAACCGGAAGGTCCGGTGAAGAACAAGGTGGTGGATGGCGTGGCGAAGGCGAACAAGTTCACAAGCATTGCCTTAGCCTTTGTGAATTATTACGCTAAGAAAGGTTCGCCTTAA 591 0.5618 MKALIPLIFSLLLLAATFHHLPQSSAAVPGDSDFIRSACNTTLYADLCHSSISPYANAIKQNPSALARVGVAVAHAVVRGVATDVSALSREAKGRAAGAINDCISILGDAVDQMSESLGQLRQIAAGKGGDFKFAIDTVLTEMSAALTNEDTCTDEFQDEPEGPVKNKVVDGVAKANKFTSIALAFVNYYAKKGSP 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2838 196 SMART PMEI_2 30 186 IPR006501 GO:0004857
Prci10g2838 196 CDD PMEI-like_3 37 192 - -
Prci10g2838 196 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 190 IPR035513 -
Prci10g2838 196 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 32 190 IPR035513 -
Prci10g2838 196 NCBIfam pectinesterase inhibitor domain 3 190 IPR006501 GO:0004857
Prci10g2838 196 Pfam Plant invertase/pectin methylesterase inhibitor 33 185 IPR006501 GO:0004857
Prci10g2838 196 PANTHER PECTINESTERASE INHIBITOR-LIKE 7 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2838 Prci-Chr10 36958771 36959521 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2838 35 185 Carbohydrate Esterase AT5G53370 25.806 1.18e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2838 - - pcin:129321402 358.607