Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2819 ATGAGTATGTCTGATTCTTTCATGAGTACCTTCAAGCTTCACTCTTACACTCCAAACCCCACCATTATTTCCCCATCAGCTCCAGAAATAGCTCCGAATCCTTATTGCAATTGTGCTCACTGTAGCCACTTTTTCTCCTTCGATATTCACCATCTGGATTATGTAGGAGATCATGAGGAAGGAGGAGGTATTATTACAAGTAGCTCGAGGTGGAGTCCGACAGCTGCACAACTGCTATACCTTGAGGAAGTGTACAGGCATGGAATCAAGACACCGACGGCTCAACAAATCCAGCAAATAACTTCGCAGCTACGTCGTTTTGGCAACATCCAAGCCAAGAATGTCTTCTACTGGTTCCAGAACCACAAAGCAAGAGAGCGCCAGAAACGTCGTCGTTGCGAGATGGAGATTCCTCCTCCTCTTGCTCAGCAAGACAAAGATCATCAGCTGTGTGTTATGCCACAGCAAGAGCCTCCTCAAGGATTGAGAGGGACAGGTTATGAAGTTAAAGAGACAAACAAGTTGGCATCTCCTTTAAACTGCAGTGCACTTGCAGAGGTTTCTGATTCACAGAATACAGAAGAAAGACCAGGAGCTTGCAGGAGGACTCAAAGGAGGGAGGGAGAAAGTACACACATTTTGAGAATCAAGAGAGAGGAAAGCCAAGAAGCTAGGTGCCAAATTAGAGATATGTATTGCTTCCTTTCAACTTCAACTACAACTCATACACAAACTTCAAACCTTAAAAATTATCGTGATGATGAAGAAGTCGCAGATGACAGAACCCTTAAGCTGTTTCCACTCAAGAGAGAGGAATATGAAGATGATGAGGAGGGCATTTATGTCAATGATGAAAGCAGGAAAGATAAACTATGTGCCTATAATGCTTCCATGGTCTCTGAAATCACTTGCAACCAGTTTTTTGAGTTCCTTCCTTTAAGAAACTGA 948 0.4335 MSMSDSFMSTFKLHSYTPNPTIISPSAPEIAPNPYCNCAHCSHFFSFDIHHLDYVGDHEEGGGIITSSSRWSPTAAQLLYLEEVYRHGIKTPTAQQIQQITSQLRRFGNIQAKNVFYWFQNHKARERQKRRRCEMEIPPPLAQQDKDHQLCVMPQQEPPQGLRGTGYEVKETNKLASPLNCSALAEVSDSQNTEERPGACRRTQRREGESTHILRIKREESQEARCQIRDMYCFLSTSTTTHTQTSNLKNYRDDEEVADDRTLKLFPLKREEYEDDEEGIYVNDESRKDKLCAYNASMVSEITCNQFFEFLPLRN 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2819 315 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 62 289 IPR044555 GO:0003700|GO:0099402
Prci10g2819 315 Gene3D - 68 134 - -
Prci10g2819 315 ProSiteProfiles 'Homeobox' domain profile. 70 129 IPR001356 GO:0003677
Prci10g2819 315 SMART HOX_1 66 133 IPR001356 GO:0003677
Prci10g2819 315 SUPERFAMILY Homeodomain-like 69 132 IPR009057 -
Prci10g2819 315 MobiDBLite consensus disorder prediction 186 210 - -
Prci10g2819 315 Pfam Homeodomain 68 128 IPR001356 GO:0003677
Prci10g2819 315 CDD homeodomain 70 130 IPR001356 GO:0003677
Prci10g2819 315 MobiDBLite consensus disorder prediction 195 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2819 Prci-Chr10 36660049 36663315 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2819 65 132 Wox Gene Family AT3G18010 70.588 9.51e-28 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Prci10g2819 Homeodomain 2e-16 CL0123