Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2811 ATGGACGACCAAGTTGTTCAGCGCGTCTTCCATGAAGGAGGCCGAGACTATTATCAACAACAGCCTTCAACATCCTCATCTTCCTCCTCAATCCTCCAATCTCTCCCTCTCCATGTGTCTTTTGATCATGGCTATTATTTGTTAGTAAAATCTATCCAAGAACTTCGAGAGAAAAAAGAGGGTCTTGTTACGGTTGGCATTGGTGGTCCTAGTGGTTCTGGTAAAACAAGCTTAGCAGAGAAGGTGGCATCTGTTATTGGTTGCACTGTTATATCAATGGAGAATTATCGCAGTGGAGTTGATGAAGGCAATGATTTGGATTCTATAGACTTTGATGTCTTGGTCAAGAATCTTGAGGATTTGACAAAAGGCAATGATACACTGATTCCAGTGTTTGACTATCAACAAAAGAGACGTGTTGGATATAAGACAATAAAGAGTTCTTCATCGGGGGTGGTAGTGGTTGATGGTACATATGCTCTGAATGCAAAACTGCGGTCTTGGCTAGATATTCGAGTTGCAGTGGTTGGTGGTGTTCATTTTAGCTTGCTTTCTAAAGTTCGCTATGATATTGGAGATTCTTGTTCACTGGATTACCTTATTGACAGTATTTTCCCATTGTTCCGGAAGCACATTGAGCCAGATCTTCATCATGCACAGATCAGAATTAATAACAGCTTTGTTTCATCATTTAGAGAAGCCATCTACAAGGTGAAATGCAGAAGTGAGTCTCCTGATGGACATTTGGGTTCTGCCTTTCAACAAGATGAAGCCCAGACAGACAATTGTATAGAGATGTACCTTAGACCTCCTTCGGCTAGTGAAGAAGCAAGGATTAATGATTGGATCAAGGTGCGGCAATCTGGAATTAGATATTATCTTTCCCTTGGTGACCAGAGGATTGTTGACAAAAATTTTATTATCAGACCAAAGGCTGAGTTTGAGGTTGGGCGAATGACATTAGGAGGGTTGCTTGCTCTGGGTTACTCTGTTGTCGTTAGCTATAAACGTGCATCTACAACACTCAGTAATGGCAATGTTTCTGCGTCTTTTGAAACCATTGATGCTCTGGGTGAGACATACATGGTGCTGAGGGGAACAAATAGGAAAACAGTTGGAACAGAAGCATTGAAGATGGGTGTAAGTGGCCCTTGGATCACTAAATCATACCTGGAAATGATTCTTGAGAGAAAAGGTGTACCTCGTCTCAGTACACCACCACTTGTGTCTAATACACTTACACCTGGTGATCAAGAAAGAGCAGTTGTTGCACCAAAGCCAATCCGAGTTACCCCTGACCTTGTAACTGGACTCGAGGATTTATCTCAGCCATGGACTCGATCCCCAAGAAAGTCCAAAATGGAACCTGTCATAGCAACTTGGCATTTTATATCTTCGGATTCATCTCTGACTGACAACACAGTACTAGATCCTTCATCTTTCAGGGATACCATGAGACTTGCTCCAATGCCTGATTCCTATGACGTTGATAGGGGATTGCTTTTGGCCGTTCAAGCAATACAGGCTTTGTTGGAGAAGAAAGGAGTTCCCGTCATAGTTGGCATTGGAGGTCCAAGTGGGTCTGGAAAGACTAGTTTGGCCCATAAAATGGCAAATATCATTGGTTGTGAGGTAGTTTCTCTGGAAAGCTATTATAAACAAGTAAAGGATTTTAAATATGACGACTTTGGCTCACTTGATCTGGCTTTACTGTCAAAGAATATTGATGACATAAGAAATGTTCGAAGAACAAAAGTTCCTATATTTGACCTGGAAAGTGGTGCTCGGAGTGGCTTCAAGGAACTTGAAGTTTCTGAAGATTGTGGAGTGATTATATTTGAAGGGGTTTATGCTTTGCATCCTGATATGCGAAAATCTCTTGACTTGTGGATTGCTGTTGTAGGAGGTGTTCATTCACATTTGATATCTCGAGTTCAAAGGGATAAGAGTAGAGTGGGATGTTTTATGTCTCAAAATGAGATTATGATGACAGTATTTCCTATGTTCCAGATGCATATTGAACCACATCTTGTCCATGCACATCTTAAGATAAGAAATGACTTTGACCCTGTTCTTTCCCCTGAGAGTTCCTTGTTTGTATTGAAGAGCAACAAAAAGGTAGCTTATCAAGACATTCTTACGATTCTTGATCCAGCAAAATTTTGCAGTTCTGTTCAGAAGTTCATTGATATATATTTAAAGCTTCCTGGGATCCCCTCTAACGGACAGTTGACAGAGGGTGATTGCATAAGAGTCAGAATATGTGAAGGAAAATTTGCTTTGTTGATACGTGAGCCTATTAGAGAAGGAAACTTCATCATTCAGCCCAAAGTGGATTTTGATATTGGCATTAGTACGGTTGCAGGTCTTTTCAATCTTGGGTATCAGGCAGTAGCTTATATTGAAGCATCTGCGTTGATTTACCAGGATGGAAAGATTCTGATTGAGGTCGACCATCTACAAGATGTCTCCGGTCCATACATTCAGATTAAGGGTGTTGATAAGAATGCCGTGGCAGCAGCTGGTTCAATGCTTAAATTGGATGGTTCATATACTACTAAAAGCTATCTTCAAATAATTTTGGAAAACCTACCTGCACTAGAAAGAACTTTTGGTGGCATACACTCTCAGCAGTCTGCGAGGATGCAAGAAATTGTTGAGTTTATTCAATCTCAGGGAAGCAGCTCAGCATCAGAATGCTCACCAAGCAGGGTGACGTCCCCTATGGAAGGAATTATCGAGGAGATGCAATCCAGAATTAGAAGGCTTGAACGGTGGCTTGCTGTAAATACGGTTTTATGGACATTTCTGATGTCTGCTCTCGTGGGTTATTCACTATATCAAAGGAAGCGTCAATGA 2859 0.412 MDDQVVQRVFHEGGRDYYQQQPSTSSSSSSILQSLPLHVSFDHGYYLLVKSIQELREKKEGLVTVGIGGPSGSGKTSLAEKVASVIGCTVISMENYRSGVDEGNDLDSIDFDVLVKNLEDLTKGNDTLIPVFDYQQKRRVGYKTIKSSSSGVVVVDGTYALNAKLRSWLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPDLHHAQIRINNSFVSSFREAIYKVKCRSESPDGHLGSAFQQDEAQTDNCIEMYLRPPSASEEARINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPKAEFEVGRMTLGGLLALGYSVVVSYKRASTTLSNGNVSASFETIDALGETYMVLRGTNRKTVGTEALKMGVSGPWITKSYLEMILERKGVPRLSTPPLVSNTLTPGDQERAVVAPKPIRVTPDLVTGLEDLSQPWTRSPRKSKMEPVIATWHFISSDSSLTDNTVLDPSSFRDTMRLAPMPDSYDVDRGLLLAVQAIQALLEKKGVPVIVGIGGPSGSGKTSLAHKMANIIGCEVVSLESYYKQVKDFKYDDFGSLDLALLSKNIDDIRNVRRTKVPIFDLESGARSGFKELEVSEDCGVIIFEGVYALHPDMRKSLDLWIAVVGGVHSHLISRVQRDKSRVGCFMSQNEIMMTVFPMFQMHIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNKKVAYQDILTILDPAKFCSSVQKFIDIYLKLPGIPSNGQLTEGDCIRVRICEGKFALLIREPIREGNFIIQPKVDFDIGISTVAGLFNLGYQAVAYIEASALIYQDGKILIEVDHLQDVSGPYIQIKGVDKNAVAAAGSMLKLDGSYTTKSYLQIILENLPALERTFGGIHSQQSARMQEIVEFIQSQGSSSASECSPSRVTSPMEGIIEEMQSRIRRLERWLAVNTVLWTFLMSALVGYSLYQRKRQ 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2811 952 Gene3D - 63 242 IPR027417 -
Prci10g2811 952 SMART AAA_5 516 660 IPR003593 GO:0016887
Prci10g2811 952 SMART AAA_5 61 211 IPR003593 GO:0016887
Prci10g2811 952 SUPERFAMILY CYTH-like phosphatases 725 859 IPR033469 -
Prci10g2811 952 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 505 687 IPR027417 -
Prci10g2811 952 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 63 176 IPR027417 -
Prci10g2811 952 PRINTS Uridine kinase signature 517 534 - -
Prci10g2811 952 PRINTS Uridine kinase signature 638 648 - -
Prci10g2811 952 PRINTS Uridine kinase signature 544 555 - -
Prci10g2811 952 Pfam Phosphoribulokinase / Uridine kinase family 519 684 IPR006083 GO:0005524|GO:0016301
Prci10g2811 952 Pfam Phosphoribulokinase / Uridine kinase family 65 223 IPR006083 GO:0005524|GO:0016301
Prci10g2811 952 Gene3D - 516 693 IPR027417 -
Prci10g2811 952 CDD UMPK_like 64 226 - -
Prci10g2811 952 PANTHER URIDINE KINASE 495 881 - -
Prci10g2811 952 Gene3D - 701 864 - -
Prci10g2811 952 CDD UMPK_like 519 687 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2811 Prci-Chr10 36591945 36608024 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2811 512 653 PRT Gene Family AT1G55810 25.325 1.64e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2811 - - gmx:100778905 1650.18