Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2802 ATGCCAAGCAGTAATGACGATGAGGAGGAAATCACAAATATGGAGGAAGGTGAAACTAAACCCTCAAAAGGATCTGGTTTTTGTGGTTCTTCTTCCACAGTTCCAATCATACAGAAGGTAATTGCGGAGGCAATAGGGACATACTTGGTGGTATTTGCAGGGTGTTGTTCAGTGGTTTTGAATGTGCTAGATGGGAGAGTGACGTTTCCTGGGGTGTGTGTCGTTTGGGGTTTAGCTGTGATGATCATGGTTTACGCGGTCGGGCACATCTCCGGCGGCCATTTTAATCCGGCGGTGACAGTCACGTTCAGCATCTTCCGGCAGTTTCCTTTGAGACAGGTGCCACTGTATATAATAGCACAGGTGGTGGGATCAATACTAGCGAGTGGGACACTGTACATGTTGTTCGAGGTAGACGACGAGTCGTATTTTGGGACGTTGCCGTCAGGATCAAATGTTCAGTCACTGGTGATGGAGATCATCACTTCTTTCTTGTTGATGTTCGTTGTTTCTGCTGTTGCAACTGATACGAGAGCTATTGGAGAACTGGCAGGAATTGCAGTCGGCATGACGATTGCTGTGGATGTCTTCATTGCTGGTGTCTGGAGCATCAATGAACCCAGCAAGAAGTATTGGGCCAGCAATAATAATGAACATTTATGA 663 0.4661 MPSSNDDEEEITNMEEGETKPSKGSGFCGSSSTVPIIQKVIAEAIGTYLVVFAGCCSVVLNVLDGRVTFPGVCVVWGLAVMIMVYAVGHISGGHFNPAVTVTFSIFRQFPLRQVPLYIIAQVVGSILASGTLYMLFEVDDESYFGTLPSGSNVQSLVMEIITSFLLMFVVSAVATDTRAIGELAGIAVGMTIAVDVFIAGVWSINEPSKKYWASNNNEHL 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2802 220 PANTHER AQUAPORIN NIP2-1 9 201 IPR034294 -
Prci10g2802 220 MobiDBLite consensus disorder prediction 1 26 - -
Prci10g2802 220 ProSitePatterns MIP family signature. 94 102 IPR022357 -
Prci10g2802 220 Gene3D Glycerol uptake facilitator protein. 2 205 IPR023271 -
Prci10g2802 220 PRINTS Major intrinsic protein family signature 113 132 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci10g2802 220 PRINTS Major intrinsic protein family signature 38 57 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci10g2802 220 PRINTS Major intrinsic protein family signature 158 176 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci10g2802 220 PRINTS Major intrinsic protein family signature 76 100 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci10g2802 220 SUPERFAMILY Aquaporin-like 34 203 IPR023271 -
Prci10g2802 220 Pfam Major intrinsic protein 32 200 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2802 Prci-Chr10 36460240 36462275 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2802 1 200 Major Intrinsic Protein MIP AT5G37810 60.680 2.07e-81 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2802 K09874 - aew:130768857 276.174