Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g2801 ATGCCAAGCAGTAATGACGATGAGGAGGAAATCACAAATATGGAGGAAGGTGAAACTAAACCCTCAAAAGGATCTGGTTTTTGTGGTTCTTCTTCCACAGTTCCAATCATACAGAAGGTAATTGCGGAGGCAATAGGGACATACTTGGTGGTATTTGCAGGGTGTTGTTCAGTGGTTTTGAATGTGCTAGATGGGAGAGTGACGTTTCCTGGGGTGTGTGTCGTTTGGGGTTTAGCTGTGATGATCATGGTTTACGCGGTCGGGCACATCTCCGGCGGCCATTTTAATCCGGCGGTGACAGTCACGTTCAGCATCTTCCGGCAGTTTCCTTTGAGACAGGTGCCACTGTATATAATAGCACAGGTGGTGGGATCAATACTAGCGAGTGGGACACTGTACATGTTGTTCGAGGTAGACGACGAGTCGTATTTTGGGACGTTGCCGTCAGGATCAAATGTTCAGTCACTGGTGATGGAGATCATCACTTCTTTCTTGTTGATGTTCGTTGTTTCTGCTGTTGCAACTGATACGAGAGCTATTGGAGAACTGGCAGGAATTGCAGTCGGCATGACGATTGCTGTGGATGTCTTCATTGCTGGGCCAGTGTCTGGAGCATCAATGAACCCAGCAAGAAGTATTGGGCCAGCAATAATAATGAACATTTATGATTCCATTTGGGTGTATGTAGCTGGCCCCTTCATTGGCGCCATTGTTGGTGCCTTTGCCTACAGCCTCATTAGATTCACTGATAAGCCTCTCCGAGAAATCAGCAAAGCTCCTGGTTCCATGTTTAAATGCGTCTCCACTCGCTTGTAA 816 0.4706 MPSSNDDEEEITNMEEGETKPSKGSGFCGSSSTVPIIQKVIAEAIGTYLVVFAGCCSVVLNVLDGRVTFPGVCVVWGLAVMIMVYAVGHISGGHFNPAVTVTFSIFRQFPLRQVPLYIIAQVVGSILASGTLYMLFEVDDESYFGTLPSGSNVQSLVMEIITSFLLMFVVSAVATDTRAIGELAGIAVGMTIAVDVFIAGPVSGASMNPARSIGPAIIMNIYDSIWVYVAGPFIGAIVGAFAYSLIRFTDKPLREISKAPGSMFKCVSTRL 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g2801 271 MobiDBLite consensus disorder prediction 1 26 - -
Prci10g2801 271 ProSitePatterns MIP family signature. 94 102 IPR022357 -
Prci10g2801 271 PANTHER AQUAPORIN NIP2-1 9 252 IPR034294 -
Prci10g2801 271 SUPERFAMILY Aquaporin-like 34 255 IPR023271 -
Prci10g2801 271 PRINTS Major intrinsic protein family signature 189 211 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci10g2801 271 PRINTS Major intrinsic protein family signature 226 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci10g2801 271 PRINTS Major intrinsic protein family signature 158 176 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci10g2801 271 PRINTS Major intrinsic protein family signature 38 57 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci10g2801 271 PRINTS Major intrinsic protein family signature 76 100 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci10g2801 271 PRINTS Major intrinsic protein family signature 113 132 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci10g2801 271 Pfam Major intrinsic protein 32 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci10g2801 271 CDD MIP 38 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci10g2801 271 NCBIfam MIP family channel protein 42 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci10g2801 271 Gene3D Glycerol uptake facilitator protein. 2 256 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g2801 Prci-Chr10 36460014 36462275 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci10g2801 1 268 Major Intrinsic Protein MIP AT5G37810 60.949 8.10e-117 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g2801 K09874 - aew:130768857 366.696